Tabrizicola piscis: EI545_05415
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Entry
EI545_05415 CDS
T05742
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
taw
Tabrizicola piscis
Brite
KEGG Orthology (KO) [BR:
taw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taw03400
]
EI545_05415
Enzymes [BR:
taw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI545_05415
DNA repair and recombination proteins [BR:
taw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EI545_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZL58326
UniProt:
A0A3S8U3Y5
LinkDB
All DBs
Position
complement(1132306..1135488)
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AA seq
1060 aa
AA seq
DB search
MSQNPSDLGLVIVPAGAGAGKTHRIKTQLSDWVKRKVVRPERILAVTFTEAAAGELRERI
RAGLLADGLVEEAMAVERAYVSTIHGLGLRLLTEHALAAGASLQPRHLGDAERDLLIRQA
LAHAKALDPIKATPERFGYQANWQKGETVEASLRARVLAMIDLLRGLGDTGREPRLIAPA
LARLDRIYGPTLADPVAACDALWAAVLAMLAAFPEGGMATVTAKVPRDTLEKNLSLFRRI
ERDPELLGHDWSIWQSLRGLLVSNSRTKTPEGYDDLATAIMQAADVLPSHPGPLADAKLH
LSCLIACAQEVMEAYEARKMALGLIDFADMIAGAERLLRNDPAVRQAVLDEIDCVIIDEF
QDTNPVQFALLWQLGARAPRTLLVGDVKQSIMGFQGADPRLSQALAAANPDATQPLDRNW
RSTPAVMRFINAMGAGLFGAGYNPLAPTRDPVPGPAIEVLQVVKGRGVKKSSKPQEHVAE
RITRILTEGETITDRQTGAVRAARPSDIALLVCRHATAGRYAEELRARGVPVRIADDGWA
ASPVVRAARAALSYAANPADAHAGLLLRTLGPDPLPLQDAISAQIDGRLADDPVLMGLAA
LSDRLSRLPVGVALDLVLDAAGLRHWAARQLDAAQARADLLRLEAEASDFESAHRDLKAA
SGFHGETAKVFLGWLDARAGDRDFDRRPDPTADSAEAVEIVTWHGSKGREWPITVVAEFD
HRIEEWPGTTATRFDALDKIDDMSAVLASAALIHTPGFAAPEAARRFIEDRRADFEANAR
NLLYVALTRARNRLVLEWPDFLKERDDDAPEATCLFHVMEDSCAPQIADGMLRIGGTDCP
ALISQLPEHAGATDYELGADSDAPRFGGETPLPAAALTPWRLPPSLATTAQPAPVSQGVT
LGDPWSRTISDAARGTALHLAMRTCLTRPDLIAALPSATGLDEAAVVLVAERAAALKAWL
SDAGYTDLQCEIPVLGHSPDGAEIPGMIDLMAIGPQGCLLIDHKTGGAGAGFGPYWPQLS
AYAGLVEQMLRAGSLRGIALHWVDHGTLELAEFAAKEEVR
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacccttcagatcttggtctggtcatcgtgcctgccggtgcgggtgcgggc
aaaacgcatcgcatcaagacgcaattgtccgactgggtcaaacgcaaggtcgttcgccct
gagcgtatccttgccgtgaccttcacggaagcagcggccggtgaattgcgtgaacgcatt
cgggcgggtcttctggcggatgggctggtggaggaggctatggcggtcgagcgggcctat
gtctcgaccatccacgggctgggcctgcggctcttgacggaacatgcccttgcggcaggc
gcctcgcttcaaccgcgccatctgggcgatgccgagagggatctgctgatccggcaggcc
ttggcccatgccaaggcgctggatccgatcaaggccaccccagagcggttcggctatcag
gcgaactggcaaaagggcgaaacggtcgaggcttccctgcgcgcccgcgtcttggcgatg
atcgaccttctgcggggcttgggcgacacagggcgcgaaccccgcctgatagccccggcg
ctggcccggcttgaccggatctatggcccgacactggctgacccggtggccgcctgcgat
gcgttatgggcggcagtcctggcgatgctggcggcctttccagagggcgggatggccacg
gttacggcaaaagtgccgcgtgacacgctggaaaagaacctttcgctgtttcggcgcatt
gaaagggaccccgagcttctgggtcacgactggagcatctggcaatcgctgcgcggcctg
ttggtctcgaacagccgcacaaagacgccggagggctatgatgatctggcgactgcaatc
atgcaggccgccgatgtcctgccttcccatcccggtcctctcgccgacgcaaaactgcat
ctgtcatgtctgatcgcctgcgcccaggaagtaatggaggcctacgaggcgagaaagatg
gcgcttggtctgatcgactttgccgacatgatcgcgggggccgaacgcctgctgcgcaac
gatcccgccgtacggcaagccgttctggacgaaatcgattgcgtcatcatcgacgaattc
caggacaccaacccggttcagttcgctctgctttggcaattgggcgcgcgggcgcctcgc
accttgctggtgggcgatgtgaagcagtcgatcatggggttccagggggctgatccgcgg
ctgtcgcaggcgctggccgccgcgaaccctgacgccacgcaaccgcttgatcgcaactgg
cggtcgacacctgccgtcatgcgattcatcaacgccatgggcgccggtctgttcggcgcg
ggctacaacccgctcgccccgacccgcgatccggtgcccggtccggcgatcgaggtgctg
caggtggtgaaagggcgcggggtcaagaaatcctccaaaccgcaggaacatgtggccgaa
cgtatcacccgcattctgaccgaaggcgagacgattaccgaccggcagaccggcgcagtt
cgtgctgcgcgcccgtctgatatcgctctgctggtctgccgccatgccactgccggtcgc
tatgctgaggaactccgcgcccgcggtgttcccgtgcgcattgccgatgatggctgggcg
gcaagccccgtggtccgggcggcgcgtgccgcgctcagctatgctgccaaccccgccgat
gcccatgccgggctcttgctacgtacgctcggccccgatccgctgccgctgcaagacgca
atttccgcgcagatcgacgggcggctggcggacgatcccgtgctgatgggacttgcagcc
ctgtctgaccggttgtcgcgtctgccggttggtgttgcgttggacctcgtgcttgacgca
gcgggcctgcgccactgggcggcgcgtcagcttgatgcggcccaggcgcgcgctgatctg
ttgcggctggaggcagaggccagcgatttcgaatccgcacatcgcgacctgaaggcggcg
tccggtttccatggagagacggccaaggtgtttctgggctggctcgacgcccgcgcgggt
gatcgcgacttcgaccgccgtccggaccctacggcggacagcgccgaggcggtcgagatc
gtgacttggcacggctccaaaggccgcgaatggccgattaccgtggtcgcagaatttgac
catagaatcgaagaatggccgggcaccacggcgacccggtttgacgcgctggacaagatc
gacgacatgtccgcagtcttggcttctgcggcactgatccacacgccgggatttgccgcg
cccgaggcagcgcgacgtttcattgaggaccgtcgcgcagattttgaggccaatgcccgc
aatctgctttacgtggcactcacccgtgcgcgcaaccgtctggtgctggaatggccggac
ttcctgaaagaacgcgacgatgacgcgcctgaagcgacctgcctgttccacgtgatggag
gactcttgcgcaccgcagattgcggacgggatgctgcggattggcgggacggattgcccg
gcgttgatttcgcaattgcccgaacatgcgggcgcgaccgactatgagctgggtgcagac
agcgatgcgccccggttcggcggcgaaacgccgttgcccgccgcagcgttgacaccgtgg
cggttgccgccttctttggccacaacggcccagcccgcaccggtgagccaaggtgtgacc
cttggtgacccctggtcccggacgatcagcgacgcggcacgcggtaccgcgctgcacctt
gccatgcgcacctgcctgacgcggccagacctgatagcggccctgccttcggcaacagga
ctggatgaagcggccgttgtgctggtggcagagcgggcggctgcgctgaaggcctggctg
tctgacgcaggctacacggacctgcagtgcgagatcccggttctggggcacagcccggat
ggcgccgaaatccccggaatgatcgacctcatggctatcgggccgcagggttgcctgctg
atcgaccacaagaccggaggcgcgggtgcgggcttcggcccctactggccgcaactgtcg
gcctatgccgggttggtggaacagatgcttcgcgcagggtcgctgcggggaatagcgctc
cattgggtcgatcatggaaccttggagcttgcggaatttgctgcaaaagaagaggtgcgc
tga
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