Tabrizicola piscis: EI545_10805
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Entry
EI545_10805 CDS
T05742
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
taw
Tabrizicola piscis
Pathway
taw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI545_10805 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taw03021
]
EI545_10805 (rho)
03019 Messenger RNA biogenesis [BR:
taw03019
]
EI545_10805 (rho)
Transcription machinery [BR:
taw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EI545_10805 (rho)
Messenger RNA biogenesis [BR:
taw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EI545_10805 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
S1CSD-TOTE-2
NACHT
AAA_25
ATPase_2
AAA
OB_RNB
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AZL59291
UniProt:
A0A3S8U6R1
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All DBs
Position
2214886..2216157
Genome browser
AA seq
423 aa
AA seq
DB search
MTVERLNLSDLKAKTPADLLAMAEEWEIENAPSMRKGEMMFSILKEHAEEGWEIGGDGVL
EVLQDGFGFLRSPSANYLPGPDDIYVSPDILRQFSLRTGDTIEGVIAAPKDNEKYFCMTK
VTRINFDDPEKARHKVHFDNLTPLYPDERLKMEVEDPTIKDRSARIIDLVAPIGKGQRGL
IVAPPRTGKTVLLQNIANSIAQNHPECYLIVLLIDERPEEVTDMQRTVKGEVVASTFDEP
ATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEDLLVDKTDLQKTYVLRRILNPMGTTDAIEFLIGKLKQTKSNADFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgaacgtttgaacctctctgacctcaaggccaagaccccggctgaccttctc
gccatggccgaggagtgggagatcgagaacgcccccagcatgcgcaagggcgagatgatg
ttctcgatcctgaaagagcatgccgaggaaggctgggaaatcggcggcgatggcgtgctg
gaggtgctgcaggacgggttcggcttcttgcgctcgccttccgcgaactatctgccgggg
ccggatgacatttacgtctcccccgacatcctgcgccagttttcgctgcgcaccggggac
acgatcgaaggcgtgatcgccgcgccgaaggacaacgaaaagtacttctgcatgaccaag
gtcacgcggatcaacttcgacgacccggaaaaagcgcgccacaaggttcacttcgacaac
ctgacgccgctttatcccgacgaacggctgaagatggaagtcgaggatccgacgatcaag
gaccgctcggcccggatcatcgaccttgtggcccccatcggcaaaggccagcgcggtctg
atcgtagcacccccacggacgggtaagacggtgctgttgcagaacatcgccaactccatc
gcgcagaaccatccggagtgttatctgatcgtccttctgatcgacgaacgccccgaggaa
gtcaccgacatgcagcgcaccgtgaagggcgaggttgtcgcctccactttcgacgaaccg
gcaacgcggcacgtcgcggtggcggaaatggtgatcgaaaaggccaaacgcctggtcgaa
cacaagcgcgatgtggtgatcctgctggactcgatcactcgtctgggccgggcattcaac
accgttgtgccgtcgtcaggcaaagtgctgactggcggcgtcgacgcgaacgccctgcaa
cgcccgaaacgcttcttcggtgccgcccggaacatcgaggaaggcgggtcgctgaccatc
atcgccaccgccctgatcgacacgggcagccggatggacgaggtgatcttcgaagaattc
aagggcacgggtaactcggaaatcgtgcttgaccgcaaggttgccgacaagcgcgtcttc
ccggcgatggacatcctcaagtccggcacccggaaagaagacctgctggtcgacaagacc
gatctgcaaaagacctatgtcctgcgccgcattctgaacccgatgggcacgacggatgcg
atcgaattcctgatcggcaagttgaagcagaccaagtcgaacgccgatttcttcgattcc
atgaacacctga
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