Tabrizicola piscis: EI545_11845
Help
Entry
EI545_11845 CDS
T05742
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
taw
Tabrizicola piscis
Pathway
taw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
taw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EI545_11845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taw03400
]
EI545_11845
Enzymes [BR:
taw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EI545_11845
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EI545_11845
DNA repair and recombination proteins [BR:
taw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EI545_11845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-ProteinID:
AZL59471
UniProt:
A0A3S8U794
LinkDB
All DBs
Position
2427303..2428148
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEVETVRRGLAPVMEGAVIERAEVNRPDLRWPLPERMAERLTGARVTALRRRSKYI
LADLDSGETLLIHLGMSGRMLISGTMLGQFHHDHPAPQKHDHVVLHMQGGARITFNDARR
FGAMDLMPTGGAHALLAGLGPEPFGNDFNEPYLAARLAGRRTPIKSALLDQRIVAGLGNI
YVCETLFRARISPLTLAGDLAETAVHGLVPIIREVLAEAIEAGGSSLRDFRQANGELGYF
SKHFQVYDREGDPCETPGCRGTVTRTVQSGRSSFWCPACQS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggttgagactgtccgccgtggccttgccccggtcatggaaggc
gcggtcatcgaacgggccgaggtcaaccgccccgatctgcgctggcccctgccggaacgg
atggccgaacgtctgacgggcgcgcgtgtgaccgcactgcggcggcggtcgaaatacatc
ctcgccgatctcgacagcggtgagactttgctcatccacctgggcatgtcgggccggatg
ctgatctccggcacgatgctgggccagttccaccatgaccaccccgcgccgcaaaagcat
gaccatgtggtcctgcacatgcagggcggcgcgcggatcaccttcaacgacgcccgccgc
ttcggcgcgatggatctcatgcccaccggcggcgcgcatgctttgctggcgggtctcggg
cccgaaccctttggcaatgatttcaacgaaccctacctcgccgcccggctggctggccgc
cgcacgccgatcaaatccgcgcttctggatcagcgcatcgtcgcgggtctgggcaatatc
tacgtctgcgaaaccctgttccgcgcccgcatcagccccctgacccttgccggtgacctt
gcggaaaccgccgtccacggccttgtcccgatcatccgcgaagtgctggccgaggcgatc
gaggcgggcggctcctccttgcgcgatttccggcaggcgaatggcgagcttgggtatttt
tccaagcatttccaagtctatgaccgtgagggcgacccctgcgaaacccccggctgcagg
ggcaccgtcacccgcacggtgcaatccggccgctcctccttctggtgccccgcctgccag
agttga
DBGET
integrated database retrieval system
