Tabrizicola piscis: EI545_13110
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Entry
EI545_13110 CDS
T05742
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taw
Tabrizicola piscis
Pathway
taw03030
DNA replication
taw03430
Mismatch repair
taw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EI545_13110
03430 Mismatch repair
EI545_13110
03440 Homologous recombination
EI545_13110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taw03032
]
EI545_13110
03400 DNA repair and recombination proteins [BR:
taw03400
]
EI545_13110
Enzymes [BR:
taw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EI545_13110
DNA replication proteins [BR:
taw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EI545_13110
DNA repair and recombination proteins [BR:
taw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EI545_13110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AZL59688
UniProt:
A0A3S8U802
LinkDB
All DBs
Position
2681000..2684521
Genome browser
AA seq
1173 aa
AA seq
DB search
MSSAPRFIHLRTHTEHSLLEGAVPVKKLIDLCTAASMPAVAVTDTNNMFAALEFSVTAMG
AGVQPIVGCQISVAHDPAQPGEKPRAPAPIVLLAQDESGYLNLMQLNSRLYIDGAMSGAA
NLPQVTLDELARHSAGLICLTGGPEGPLGRFHATGQTAKARSLLERLTTIYPNRLYVELQ
RHPGPGGALSEPEMLAERGAVELAYDLGLPLVATNDVYFPKSSMYEAHDALICIAEGAYV
DQQQPRRRLTPQHYFKSEAEMATLFADLPEALENTVEIARRCAFAVKKHAPILPRFADDE
VQELRRQANAGLQARLAVIPHSATPEEYQARLDFELGIIEKMGFPGYFLIVSDFIKWAKD
HNIPVGPGRGSGAGSLVAYALTITDLDPLRYALLFERFLNPERVSMPDFDIDFCMDRREE
VISYVQEKYGRDRVAQIITFGALLSKAAVRDVGRVLQMSYGQVDKLSKMIPVEGVKPVSI
TKALADEPRLREAAKEEVVGRLLEYAKEIEGLYRNASTHAAGVVIGDRPLDQLVPLYRDP
RSDMPATQFNMKWVEAAGLVKFDFLGLKTLTVIQNAMDLLALRGISFDINLIPLDDQPAY
DLYAAAKTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPAYCEVKNGLR
DLESIHPTIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKNPVEMARER
PKFIEGAKATHNIDAAKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAYLKANYPAEFM
AAVMNCDLHLTDKLAVYKREVDKLGLKTIAPCVNASLATFTVRDGALVYGLGALKNVGVD
AMQLIVQARQEPQGAAHPPSSPSSPTGAAITPVRAEERPFATLFDFARRVDLKRIGKRPL
EMLARAGAFDQLDPNRARVFEALDPLVAYSAAIHEATASAQVSLFGSAGADIPEPRLPFR
DDWLPVERLAQEHQAIGFYLSGHPLDDYMSALKRQNVETLAQVTARAERGPITAKIAGSV
SSRQERKSARGNRFAFVQLSDPTGLYEVTCFSEVLEASRDHLDPGQNIVLTVKAELEGET
LKLLAQAIAPIDAVAAQGGAQSIRIHLARPEAVPSLASLLSRVEGRSRAQITLCITDPAG
REVDITLPDAYPITPQIKGAIKAMHGVLAVEEI
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgcgccccgattcatccaccttcgcacccataccgaacattcgctgcttgaa
ggcgcggtcccggtcaagaaactcatcgacctttgcacggcggcgtcaatgcccgccgtc
gccgtgaccgacacgaacaacatgttcgccgcattggagttttcggtcaccgccatgggg
gcgggtgtccagcccatcgtcggctgccagatctctgtcgcgcatgaccccgcccaaccg
ggcgaaaagccccgcgcgcccgcgcccatcgtcctgctggcacaggacgaatccggctat
ctgaacctgatgcaactgaactcgcgcctctacatcgacggcgcgatgtcgggtgccgcc
aacctgccgcaagtgacgctggacgaacttgcacggcacagcgccggcctgatctgcctg
accggcggtccggaaggcccgcttggccgcttccatgccaccggccagaccgccaaggcg
cgcagcctgctggaacggctgaccacgatctacccgaaccgcctttatgtggagctgcaa
cgccacccgggccccggcggcgcgctttcggaacccgagatgctggccgaacgtggtgcc
gtggaactggcctatgaccttggcctgccgctggttgccaccaatgacgtctacttcccc
aaatcctcgatgtatgaggcgcatgatgccctgatctgcatcgccgaaggggcctatgtc
gaccagcagcagccccgccgccgcctgaccccgcagcactatttcaagtccgaagccgaa
atggcgaccctgttcgccgacctgcccgaggctttggaaaacaccgtcgagattgcccgc
cgctgcgcctttgcggtgaagaaacacgcccccatcctgccaaggttcgccgatgacgag
gtgcaagaactgcgccgtcaggccaatgccgggcttcaggcccgccttgccgtcatcccc
cactccgccacgcccgaggagtatcaggcccggctcgatttcgaactcggcatcatcgaa
aagatggggttccccggctatttcctgatcgtgtcggacttcatcaaatgggccaaggac
cacaacattcccgtcggtcccggtcggggctcgggcgctggctcgctggtggcctatgcg
ctgacgatcaccgaccttgatcccctgcgctatgcgctgctgttcgaacgcttcctgaac
ccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggatcgtcgggaagag
gtgatctcttacgttcaggaaaaatacggccgcgaccgcgtggcccagatcatcaccttc
ggcgcgcttctgtccaaggccgccgtccgtgacgtcgggcgcgtgctgcagatgtcttat
gggcaggtcgacaagctgtcgaagatgatcccggtggaaggggtgaagcccgtcagcatc
accaaggcgctggccgatgaaccccgtctgcgtgaagccgcgaaagaggaggtggtcggt
cgcctgctggaatacgccaaggaaatcgaaggcctctaccgcaacgcctccacccacgcc
gccggtgtggtgatcggcgaccgtccgctggaccagctggtgccgctttaccgcgatccc
cggtcagacatgcctgcgacccagttcaacatgaaatgggtcgaagccgccggtctggtc
aaattcgactttcttggtctgaagaccctgaccgtgatccagaacgcgatggacctcctc
gccctgcgcggcatcagctttgacatcaacctgatcccgctggacgaccagcccgcctat
gacctttacgccgccgcgaaaaccgtcgccgtgttccaggtggaaagctcgggcatgatg
gacgcgctgcgccggatgaagccgacctgcatcgaggatatcgtggccctcgtcgccctc
taccgccccggcccgatggaaaacatcccggcctattgcgaggtgaagaacggcctgcgc
gatctggaatccatccaccccaccatcgaccatatccttgcggaaacccaagggatcatc
gtctatcaggaacaggtgatgcagatcgcccaagtcatggccgggtattcgctgggcggc
gcggacttgctgcgccgcgcgatgggcaagaagaacccggtcgaaatggcccgcgaacgc
ccgaaattcatcgaaggtgccaaggccacccacaacatcgacgccgccaaagcgggtgag
gtgttcgacctgctggagaaattcgccaactacggcttcaacaaatcccacgccgccgcc
tatgccgtggtcagctaccagacggcgtatctcaaggcgaattaccccgccgaattcatg
gccgcggtgatgaactgcgacctccacctcaccgacaagctggccgtctacaagcgtgag
gtggacaagcttggcctgaaaaccatcgccccctgcgtgaacgcctcgctggccaccttc
accgtccgcgacggcgcgctggtctatggcttgggcgcgctgaagaatgtcggcgtcgat
gcgatgcagctgatcgtgcaggcgcggcaggaaccgcaaggggccgctcatccgccttca
tcgccgtcttcgccgaccggcgcagcgattacgcccgtcagggcggaagagcgtcccttc
gccaccctcttcgacttcgcccgccgcgttgacctcaaacgcatcggcaagcgcccgctt
gaaatgctggcccgcgccggggccttcgatcagctcgaccccaaccgcgcccgcgtgttc
gaagccctcgaccccctcgtcgcctactccgccgccatccatgaggcgaccgcctccgcc
caggtctcgctcttcggcagcgcgggcgctgacatccccgaaccccgcctcccgttccgc
gacgactggctgcccgtcgagcgcctcgcgcaggaacatcaggccatcggcttctacctc
tccggccacccgctggacgactacatgtccgccctcaaacgccagaacgtcgaaaccctc
gcccaagtcaccgcccgcgccgaacgcgggcccatcaccgccaagatcgccggctccgtc
tcctcccggcaggagcgcaaatccgcccgcggcaaccgcttcgccttcgtccagctgtcc
gaccccaccggcctttacgaagtcacctgcttttccgaagtcctcgaagcctcgcgcgat
caccttgaccccggccagaacatcgtcctcaccgtcaaggcggaactggagggcgaaacc
ctcaaactcctcgcccaggccatcgcccccatcgatgccgtcgcagcccagggcggcgcg
caatccatccgcatccacctcgcccgacccgaagccgtcccctccctcgcctcgctcctc
tcccgcgtcgaaggacgctcccgcgcgcagatcaccctctgcatcaccgaccccgcaggg
cgtgaggtggacatcaccctccccgacgcctaccccatcaccccccagatcaagggcgcg
atcaaggccatgcacggggtcctcgccgtcgaagagatctga
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