Tabrizicola piscis: EI545_18245
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Entry
EI545_18245 CDS
T05742
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
taw
Tabrizicola piscis
Brite
KEGG Orthology (KO) [BR:
taw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
taw03016
]
EI545_18245 (rnd)
Enzymes [BR:
taw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EI545_18245 (rnd)
Transfer RNA biogenesis [BR:
taw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EI545_18245 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZL60593
UniProt:
A0A3S8UAH9
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All DBs
Position
3755515..3756672
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AA seq
385 aa
AA seq
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MRTITTTEDLASFCAAAKSQPYVTIDTEFLRERTYWSKLCLIQMALPGANGDAVLVDPIE
GADMSLEPLYDLFRHQATVKVFHAARQDLEIFFVEGNSFPDPLFDTQIAAMVCGFGEQVG
YETLVKKIAKANLDKTSRFTDWSRRPLTEAQKDYALADVTHLRVIYEFLAAQLKKNGRAD
WVAEELAILTEPETYTIRPDEAWMRIKTRTTSGRFLAVVKALARFREAYAQTQNVPRSRV
MKDDALLELASTRPTTAEELGRSRLLLREGRKAEIADGILAAVKEGMEMRPEDMPRIDSP
REQLQVNPALADLLRVLLKAKSESLGVAPRLIASSADLDAIAAGERDLPALGGWRREAFG
EDAIRLCRGEIALSAKGSEVRVVQL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgatcaccacgaccgaagacctcgccagcttctgcgcggccgccaaatcccag
ccctatgtgaccatcgacacggaattcctgcgcgaacggacctattggtccaaactgtgc
ctgatccagatggcgctgcccggtgccaatggcgatgccgtgctcgtcgacccgatcgaa
ggcgccgacatgtcgctggaaccgctctatgacctcttccggcatcaggcgacggtcaaa
gtcttccacgccgcgcggcaggaccttgagattttcttcgtcgaaggcaacagctttccc
gatccgctgtttgacacccagattgctgccatggtctgcggctttggtgaacaggtcggc
tacgaaaccctcgtcaagaagatcgccaaggccaatctcgacaagaccagccgctttacc
gattggtcgcgccgtccgctgaccgaagcgcaaaaggattacgcccttgccgacgtcacc
catctgcgggtgatctacgaatttcttgccgcgcaactgaagaagaacgggcgggctgac
tgggtggccgaagagcttgccattctgaccgagccggaaacctacaccatccgcccggat
gaggcgtggatgcggatcaagacccgcaccacctcgggccggtttctggccgtggtcaag
gccttggcccgctttcgggaagcctatgcccagacccagaacgtcccccgcagccgggtg
atgaaggatgacgccctgctggagctggcatcgacccgccccaccacggccgaggaactg
ggccggtcgcgcctgcttctgcgcgaaggccgcaaggccgaaatcgccgatggcatcctt
gccgccgtgaaggaaggcatggagatgcggcccgaagacatgccccgcatcgattccccg
cgggaacagttgcaggtgaacccggcgctggccgaccttctgcgcgtgcttttgaaggcc
aagtcggaaagccttggcgtcgccccccgcctgatcgcgtcaagcgcggatctggatgcc
atcgcggcgggcgaacgcgacctgcccgcgctgggcggctggcggcgtgaggcgtttggc
gaagacgcgatccgcctctgccgcggcgaaatcgccctttccgccaagggtagcgaagtg
cgggtggtgcaactctga
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