Tamlana sp. s12: JJL45_04440
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Entry
JJL45_04440 CDS
T10518
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tay Tamlana sp. s12
Pathway
tay03030
DNA replication
tay03430
Mismatch repair
tay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JJL45_04440 (dnaE)
03430 Mismatch repair
JJL45_04440 (dnaE)
03440 Homologous recombination
JJL45_04440 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tay03032
]
JJL45_04440 (dnaE)
03400 DNA repair and recombination proteins [BR:
tay03400
]
JJL45_04440 (dnaE)
Enzymes [BR:
tay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JJL45_04440 (dnaE)
DNA replication proteins [BR:
tay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JJL45_04440 (dnaE)
DNA repair and recombination proteins [BR:
tay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JJL45_04440 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QQY83244
LinkDB
All DBs
Position
1060572..1064957
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDVDNWPRCIQIAWQLHDEMGRCIESQDYLVKPEGFNIPY
DAEKIHGISTELAEEQGVSLAEVLEKFNEALGKTKFVVGQNVKFDLNIMGAEFVREAVEN
NLQELPVLDTCTEHTAELCKIPGGRYGKFKLPTLTELHEFLFNEPFAEAHNATADVEATT
RCFLELIRLEEYTKEALDVQPDYFENYKKVNPEPIQLIGLKHINLKRESAKIQERIKKAQ
TVDVSSEEIKQNISELADVDFVHLHNHSQFSVLQSTMGVADIVSAAAKYNMPAVALTDHA
NMMGAFHFVNAVNRHNSGVQAKIKEAEATGATVTAKEIKPIIGCEFFVCEDHLDKTRKDN
GYQIVLLAKNKKGYHNLAKLSSHAFVDGFYYLPRIDKKLIQQYKEDIMVLTGNLYGEVPS
KVLNVGENQAEEALLWWKEEFGDDLYVEIMRHNQEDENRVNPVLIELARKHDIKLVASNN
TYYQDKKDANAHDILLCVKDGEKQATPIGRGRGYRFGLPNQEYYFKSSEEMKQLFKDVPE
AISNVQEVVDKVEAYQLARDVLLPAFDIPEEFKHDEDLVDGGKRGENAFLRHLTYEGAKK
RYGEPLSEEVIERLDFELSVIENTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVA
YCLWITNIDPMKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIDKYGSNQVAQII
TYGTMAAKSSIRDTARVLDLPLFDADRIAKLIPNMSKLNKIFGLDEKALASKFRAEELEK
VNELLNIADGSDLQAETLNLARTLEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDLY
VTQFDNSVVEDAGLLKMDFLGLKTLTLIKDTVKIVKAKHGIELDPDSFPLDDEKTYELFQ
RGETVGVFQYESPGMQKHLRDLKPTVFEDLIAMNALYRPGPMEYIPSFVRRKHGDEEIEY
DLPAMEEYLKETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQIAVLDKMKPKFI
EQASANGHDAKILEKVWKDWEAFASYAFNKSHSTCYAWIAYQTAYCKAHYPAEYMAAVLS
NNMNDIKQVTFFMDECKRMKLDVLGPDVNESYYKFSVNKDGAVRFGMGAIKGVGHGAVMT
IVDNREDGPYKSIFDLAKRIDLRAANKKAFENLALAGGFDGLADTHRAQFFHDDGDGITF
LEKAIKYAQKHKENENSAQVSLFGEASEVQIAEPEVPPCESWGTMEKLSKEREVVGVYIS
GHPLDDFKTEMKTFCNAQVGMFNDLEKYVNRELVFGGVVTDVQHRVSKQGKGWALFTIED
YYDSFEFRIFGEEYLKFRHFFMPNNFVFVKAFIREGWVNKDTGKKGDPRLQFNSFQLLHD
VMENYAKKLSIQVDINDLDDKKVMDLKELIQMHPGNQSLNFDVYDTKEKVKISMPSRRQK
VRVSQELISELESRFIRFKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacagaaaccacaggattgcctaaacgctgggatgcacccata
accgatgtagataattggccaaggtgtattcaaatcgcatggcagttgcatgacgaaatg
ggacgctgtattgagagtcaggattatttggtgaaacccgaaggttttaatattccttat
gatgctgagaaaattcacggtatttctaccgaattggccgaagagcaaggcgtgtcttta
gctgaggttttagagaaatttaatgaggccctaggaaaaacaaaatttgtagtcggacaa
aatgtgaagttcgatttaaatattatgggcgccgaatttgtgcgtgaggccgttgaaaat
aacttgcaagagctccctgttttagatacctgtaccgagcatacggccgaactttgtaaa
atccccggtggacgctacggaaaatttaaactcccaacccttaccgaattacatgagttt
ctatttaacgagccatttgccgaagcgcataatgcgactgccgatgtggaagcgacaacc
cgctgttttttagagcttattcgtttagaggaatacactaaagaagcactggacgttcag
cccgattatttcgagaattataaaaaggtcaatccagagcccattcaacttatcggatta
aagcatatcaaccttaaacgggagagtgctaaaatccaagaacgcatcaaaaaggcgcaa
accgttgatgtgtcttccgaagaaatcaaacaaaatatttctgaattagccgatgtcgat
tttgtgcatctgcataatcactcgcagttttcggtattacaatcaaccatgggtgtggcc
gatattgtttcggcagcagcaaaatacaacatgccggctgtggctttaaccgatcatgcc
aatatgatgggggcttttcactttgtgaatgcggtaaaccgacacaatagtggggttcaa
gccaaaattaaagaggccgaagctacaggagcaaccgttactgccaaagaaattaaaccc
attattggttgtgaattttttgtttgtgaagatcacttagataaaacgcgaaaagacaat
gggtatcaaattgtcctactcgctaaaaataaaaagggttatcataacctagccaaatta
tcatcgcatgcctttgtagatggtttttattatttgcctagaattgataaaaaattaatt
caacaatataaagaagatatcatggtgctcaccggaaacttatatggtgaggtgccaagt
aaagtgcttaatgttggtgaaaaccaagcggaagaagcgcttttgtggtggaaagaagag
tttggcgacgatttgtacgtcgagattatgcgccacaatcaagaagatgaaaatcgtgtg
aatcccgtgcttatagaactggcgcgtaaacatgatatcaaattggtagcttcaaacaac
acctattatcaagataaaaaagatgctaatgcgcacgatattttactttgtgtaaaagat
ggtgaaaagcaggcgacaccaattggtcgcggacgcgggtaccgattcggattgccaaat
caggaatactattttaagtcttccgaagaaatgaaacagctttttaaggatgttcctgaa
gcgatttctaatgtgcaagaggttgtagataaggttgaggcttatcaattagcacgtgat
gttttattaccagcttttgatattccagaggaatttaagcatgatgaagatttagttgat
ggtggtaagcgtggtgaaaatgcttttttaagacatttaacttatgaaggcgctaagaaa
cgttacggcgaacccctttcggaggaagttattgaacgtctcgatttcgaattaagcgtt
attgaaaataccgggtatccaggatatttcttgattgttgaagattttattcgcgaggcc
agaaatatggatgtttcggtggggccaggacgtggttcggcagcagggtcggtggtggcc
tactgcttatggattaccaatattgaccccatgaagtacgatctgctttttgagcgtttc
ttaaatcccgatcgtgtgagtatgcccgatatcgatattgatttcgatgatgaaggtcga
agtcgtgttatggattatgtcattgataaatacggctccaatcaggtggcacaaattatc
acttacggtaccatggcggcaaaatcgtctattcgagatacggcacgtgtactggattta
ccgctttttgatgccgatagaattgccaagttaattccgaatatgtctaagctgaataaa
atatttggtttagatgaaaaagcattggcttctaaatttagagctgaagaattagaaaaa
gtaaacgagcttttaaatattgccgatggaagcgatttgcaagctgaaactttaaatcta
gcccgaactcttgaaggttcggttagaaatacgggtattcatgcctgtggggtaattatc
acgccagacgatattaccaaattcgttccggtgtctctagctaaggattccgatttgtat
gtcacccagtttgataactcggtggtggaagatgcaggactgctgaaaatggatttcttg
ggactgaaaaccttaacccttattaaggatacggttaaaattgtaaaagccaaacatggt
atagagctcgatcccgatagttttcctttagatgatgagaaaacttacgaattgttccaa
cgcggtgaaacggttggggtgttccaatacgaatcacccggtatgcaaaaacaccttcgc
gatttaaaacctacggtttttgaagacttaattgccatgaatgccttgtatcgtccgggg
ccaatggaatatattccgagttttgttagaagaaagcatggcgatgaagagattgagtac
gatttaccagccatggaagagtacctcaaggaaacttatggtattacggtatatcaagag
caggtaatgttactgtcgcaaagtcttgcagggtttacaaagggtgaggccgatgtactg
cgtaaggcgatgggtaaaaagcaaattgcggtacttgataaaatgaaacctaagtttatc
gagcaagccagcgccaacggtcatgatgccaaaattttagagaaagtttggaaagactgg
gaggcctttgcaagttatgcctttaataaatcgcactccacctgttatgcttggattgct
taccaaaccgcttattgtaaagcgcattatcctgccgaatatatggcggcggtgctttca
aataatatgaatgatattaagcaggttacgtttttcatggatgaatgtaaacgtatgaag
cttgatgtattggggcccgatgtgaatgagagttactataagttttcggtaaataaagat
ggggccgttcgttttggaatgggggcgataaaaggtgttggtcatggagctgtaatgact
attgttgataatcgggaagatgggccatataaatccatattcgatttagcaaaacgtatt
gatttaagagcagccaataaaaaagcttttgaaaacctagctttagctggtggttttgat
ggtttggccgatacacatcgcgcgcaattttttcatgatgatggcgatggtattactttt
ttagaaaaagccattaaatatgcacagaaacataaagaaaatgaaaactcagcgcaagta
agtctgtttggcgaagctagtgaggtgcaaattgccgaacccgaagtgccgccttgcgag
tcgtggggtaccatggaaaaattgagtaaagagcgtgaagtggtaggggtatatatttct
gggcatcctttagatgattttaaaaccgaaatgaaaaccttctgtaacgcgcaggtaggt
atgtttaatgatttagaaaaatatgtaaatcgcgagttggtttttggtggtgtggtaacc
gatgtgcagcatcgtgtgagcaagcaaggtaaaggatgggctttatttactattgaagat
tactacgatagttttgagtttagaatttttggcgaggagtatttaaagttcagacacttt
tttatgcctaataattttgtgtttgtaaaggcttttatccgtgaaggttgggtgaataaa
gacacagggaagaaaggcgatccgaggttgcagtttaacagctttcagttgcttcatgat
gtgatggagaattacgctaagaagctttctattcaagtggatattaatgatcttgatgat
aaaaaagtgatggatttaaaagaactcattcaaatgcacccaggaaatcaatcccttaat
tttgatgtttacgacactaaagaaaaggtgaaaatatccatgcctagtagaaggcaaaaa
gtaagagtgagtcaggagttgatttccgaacttgaatctcgatttataaggtttaaatta
aactaa
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