Tamlana sp. s12: JJL45_06585
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Entry
JJL45_06585 CDS
T10518
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tay Tamlana sp. s12
Pathway
tay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJL45_06585 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tay03019
]
JJL45_06585 (recQ)
03400 DNA repair and recombination proteins [BR:
tay03400
]
JJL45_06585 (recQ)
Enzymes [BR:
tay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JJL45_06585 (recQ)
Messenger RNA biogenesis [BR:
tay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JJL45_06585 (recQ)
DNA repair and recombination proteins [BR:
tay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JJL45_06585 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_11
GerE
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QQY83651
LinkDB
All DBs
Position
1531857..1533992
Genome browser
AA seq
711 aa
AA seq
DB search
MHTTETKDKLFSNLKTYFGYDTFRAQQKEIIETVLSKKDCLVIMPTGGGKSMCFQLPALS
FEGITLVISPLIALMKDQVDGLNANGISASYFNSSQSGAEQDLIIERVIQADLKLLYVAP
ESLASLQNIINEKYISCVAIDEAHCISSWGHDFRPSYQQLGFLKGTLPNTPFIALTATAD
KATRTDIAKQLRIEHAQQFISSFDRENIELEVRPADNRISQIVKFINKTPNQSGIVYCLS
RKTTEQLAKKLKTNGISAKAYHAGLNFEERSKVQESFIFDKTQVVCATVAFGMGIDKSNV
RWVVHYNMPKNIEGYYQEIGRAGRDGLKSHALLFHSYADVIQLRNFASGASNEEFQIAKL
DRMKQFSEATTCRRKILLSYFGELLAENCGNCDVCKNPPQFFDGTIFAQKILSAVYRLKQ
AEPIGTVIDVLRGSQNATVLDKGYNQLKTFGIGRDIAYRDWQHLAIQLINQGFCEIAFHK
NNVLRLTEFSNKVLFEGAKVSLTKPVHIPEPKVKERVKRKPKASPKARVKTVENSLFERL
RQLRYKIALEEDIPAYLVFSDATLKEIERERPLSESDFLSISGVGQRKLEVYGDEFMAEI
LDFMGSKVKKPKKKATHLLTYELYKSGLSVEEISMERKLSTTTIYSHIAKLHSSGKAVNI
HDFVSKTEIEAVRKAKQELDAPSALRPYYDYFNADLDYFKIRLALSVVDKN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcacactacagaaactaaggataaattattttctaatttaaaaacgtacttcggttac
gatacctttcgtgcacagcaaaaagagattattgaaaccgttttaagcaaaaaagattgc
ttggttatcatgcctactggtggcggaaaatcgatgtgttttcagttaccagccttaagt
tttgaaggtataaccctagtcatttcgccattaattgctttgatgaaagatcaagtagat
ggtttaaatgccaatggtatttcggcttcgtattttaatagcagtcagagtggtgccgaa
caagatcttattatagaacgtgttattcaagctgatttaaaactcctgtatgtggctcca
gagagccttgcttcgcttcaaaatatcattaatgaaaaatatatcagttgtgttgctatt
gatgaggcgcactgtatttcgtcttggggacacgattttcgaccgtcatatcagcaacta
ggatttttaaaaggcacgctgcctaatacaccatttattgcattaacagccacagccgat
aaagccacgcgaaccgatatcgcgaagcaattacgtattgaacacgcgcaacaatttatt
tcctcgttcgaccgagaaaatattgaacttgaagtccgccctgccgataatagaatatct
caaatcgtaaaatttataaacaaaacacctaatcaatcgggtattgtttattgtttaagc
cgaaaaacaaccgagcaattggctaaaaagcttaaaactaatgggatttcagctaaagcc
tatcatgcggggttgaattttgaagaacgttctaaagtacaagagtcatttatttttgat
aaaactcaagtagtttgcgctacggttgcctttggtatgggtatcgacaaatctaatgtg
cgttgggtcgtgcattataatatgcctaaaaatatagaaggctattaccaggaaattggt
cgtgcaggacgggatggattaaaatcacacgctttgctatttcatagttatgctgatgta
attcaacttcggaattttgctagtggtgcatcaaatgaagaatttcaaatcgcaaaatta
gaccgcatgaagcagtttagtgaagctactacctgccgtagaaaaattttgcttagctac
tttggggaattgcttgccgaaaattgtggaaactgcgatgtttgtaaaaatccgccacag
ttttttgatggtaccatattcgctcaaaaaatcttatcggccgtatatcgtttaaagcaa
gcagaacctataggaaccgtaatcgatgtgcttcgaggttcgcaaaatgccacggtttta
gataaaggctataaccaattgaaaaccttcggaattggtagagatattgcttatcgcgat
tggcagcatttagccattcaattaataaatcaggggttttgtgaaatcgcttttcataaa
aataatgtccttcgacttaccgagttttctaacaaagttttgtttgaaggcgctaaagtc
tcattaacaaaaccagttcatattccggaaccaaaagttaaggagcgtgtaaaacgcaag
cctaaagcaagtccgaaagctcgtgttaaaaccgttgaaaatagcttgtttgagcgctta
cgccagttgcgttataaaattgctttagaagaggatattccagcatatttggtatttagt
gatgcgacgttaaaagaaattgaacgagagcgtccattaagtgaatcggactttttaagc
ataagtggtgtaggacagcgtaagcttgaagtttatggcgacgagtttatggctgagatt
ttagattttatggggtctaaagtgaaaaagccaaagaagaaggcaacacatttattaact
tacgaactttataaatcaggtttaagtgtggaagaaatctcaatggaacgtaaactttcc
acaacgaccatttattcacatatcgcgaaattacacagttcaggaaaagcagtgaatatt
catgattttgtttcaaaaacagaaattgaagccgttcgaaaagcaaagcaagaacttgat
gccccaagtgctttacgtccttattacgattattttaatgccgatctagactattttaaa
atccgtttagccctaagtgtggtggataaaaattag
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