Tamlana sp. s12: JJL45_08380
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Entry
JJL45_08380 CDS
T10518
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tay Tamlana sp. s12
Pathway
tay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJL45_08380 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tay03019
]
JJL45_08380 (recQ)
03400 DNA repair and recombination proteins [BR:
tay03400
]
JJL45_08380 (recQ)
Enzymes [BR:
tay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JJL45_08380 (recQ)
Messenger RNA biogenesis [BR:
tay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JJL45_08380 (recQ)
DNA repair and recombination proteins [BR:
tay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JJL45_08380 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
QQY80957
LinkDB
All DBs
Position
1926908..1929112
Genome browser
AA seq
734 aa
AA seq
DB search
MLIAKQDIQAALKKYFGFNQFKGLQEDVVESILSGQHTFVIMPTGGGKSLCYQLPALMQE
GTAIVVSPLIALMKNQVDAIRGVSKEEGIAHVLNSSLNKTEIKQVKSDITNGITKLLYVA
PESLTKEENVEFLRSVKISFLAIDEAHCISEWGHDFRPEYRNLRHIIKRIGDNIPIIGLT
ATATPKVQEDIIKNLGIGDAKTFKASFNRPNLYYEVRPKTKQVDADIIRFIKQNDGKSGI
VYCLSRKRVEELAQVLQVNGINAVPYHAGLDAKTRSSHQDKFLMEDVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYNYKDIEKLEKFMSGKPVAEQ
EIGQALLQEVVAFAETSISRRKFILHYFGEEFDNETGEGGDMDDNVRHPKKKTEAQTEVK
LILEVIRDSNEKYKSKDLVNVLVGQENAMINSHKTNEQPFFGSGKNHDKKYWMALLRQAL
VAGFLKKDIETYGVIKLTPEGHDFIKNPSSFLMTEDHVFEGEQEDGSIVTSQKVSGAVAD
AVLMGMLKDLRKKNAKKLGVPPFVIFQDPSLEDMALKYPITLAELANVHGVGDGKAKKYG
KSFIDLIAKYVEENDITRPEDLVVKSTGTNSANKLYIIQNIDRKLPLDDIAASKGMTMEE
FIKEMEAIVYSGTKLNIDYWIHDILDEDQQEEIHDYFMESESDNITAAIDEFDGDYDDEE
LRLYRIKFISEVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttaatagcaaaacaagacattcaggcagctttgaaaaagtactttggatttaatcaa
tttaaaggacttcaagaagatgttgttgaaagtatattatcagggcaacacacttttgtg
attatgcccacaggaggtggtaaatcactttgttaccaattaccggctttaatgcaggaa
ggtacagctattgtggtttcacctttaattgcattaatgaaaaatcaagtagacgccatt
cgaggtgtttcgaaagaggaaggtattgctcacgtattaaattcatccttaaataaaaca
gaaataaaacaggttaaatcggatatcaccaatggtattacgaaactcctgtatgttgct
ccagaatctttaactaaagaagaaaacgtcgagtttttaaggtcggtgaaaatttctttt
ttagccattgatgaagcccattgtattagtgaatggggacatgattttagacccgagtat
cgaaaccttagacatattattaagcgtattggcgacaatattccaattattggtttaaca
gcaacagccacgcctaaagtacaggaagacattattaaaaacttagggattggtgatgcc
aaaacctttaaagcgtcttttaatagaccaaatttatattacgaggtaaggccaaaaacc
aagcaggttgatgccgatattattcgttttatcaaacaaaatgatggtaaatcgggtatt
gtgtattgtttgagtcgaaaacgtgttgaagaattagcacaagttttacaggttaacggt
attaatgctgtgccttatcacgctggtttagatgctaaaacccgttctagccatcaagac
aaattcttaatggaagatgtcgatgttgtggttgctactattgccttcggaatggggatt
gataagcccgatgtgcgctttgtaatccatcatgatattccgaaaagtatagagagttat
taccaagaaacgggccgtgccggtcgtgatggtggtgaaggccactgtttggcgttttat
aactacaaagacattgaaaagttagaaaaattcatgtctggtaagcctgttgccgagcaa
gaaatcggacaagcgttgttgcaagaggttgtcgctttcgcggaaacatccatttcgaga
agaaaatttattcttcactattttggcgaagaatttgacaatgaaactggtgaaggtggc
gatatggatgataacgttcgtcaccctaaaaagaaaacggaagcccaaactgaagtcaag
ctgattcttgaagtgattcgcgatagtaatgaaaagtataagtctaaagatttagtaaat
gtgcttgttgggcaagaaaatgccatgattaattcacacaaaaccaatgaacaaccgttt
tttggttctgggaaaaatcacgataagaaatattggatggctttattaagacaagcttta
gtggcaggatttcttaaaaaagacattgaaacttacggcgttattaaattaactcccgaa
ggacacgattttattaaaaatccgagttcatttcttatgaccgaagatcatgtttttgaa
ggcgagcaggaggatggtagcattgtgacttcacaaaaagtaagtggtgcggttgctgat
gcggttcttatgggcatgcttaaagatttacgtaaaaagaacgcgaagaaattaggagtg
cctccttttgttatttttcaagatccttctctagaagatatggccttaaaataccctata
actttagcagaattggctaatgttcatggtgttggcgatgggaaagcgaagaaatatgga
aaaagcttcatcgatttaatcgcgaaatatgttgaagaaaatgatataacacgccccgaa
gatttggtagtgaagtctacaggaacaaattcggctaataagttgtatatcattcagaat
atagatagaaaattacctcttgatgatattgccgcttctaaaggcatgaccatggaagag
tttatcaaagaaatggaagctattgtttattccggaaccaaactgaatatcgattattgg
attcatgatattttagatgaagaccaacaagaagaaattcacgattattttatggaatcg
gaatcagataatatcacagctgctattgatgagtttgatggcgattacgacgatgaagaa
ctgcgtttgtatcgtatcaagtttattagtgaagtagcgaattag
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