Tamlana sp. s12: JJL45_10965
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Entry
JJL45_10965 CDS
T10518
Name
(GenBank) DEAD/DEAH box helicase
Organism
tay Tamlana sp. s12
Pathway
tay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJL45_10965
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
AAA_19
AAA_22
Baculo_Y142
DUF87
Motif
Other DBs
NCBI-ProteinID:
QQY81448
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Position
2504678..2506024
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AA seq
448 aa
AA seq
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MLKQFSDLGINEQLQQSLIDLQISEPTDVQKKAIPVVLNQKDDLVVLAKTGTGKTAAFGL
PLLQLANVENKDIQSLILTPTRELGQQIYNNLQSLASNSTEIKIVSLCGGTPIKPQIEAL
TNQSQIIIATPGRLVDLVKREAINLKSISYFVLDEADEMISALKEEVDAIINELPKTRRT
LLFTATMPGYIKQLVQNYMSKRVVHIEADMETVGHQGIDHQYVVVEPIEKLEVLMHFLNS
REGERGIIFCKTKAAVNKLAKNLAINKFSSGALHGSLSQGIRDRIMGQFRDEHIDILVAT
DLAARGIDVKNLSYVVNYHLPDTYDAYVHRSGRTARAGAKGFSLTILQEEEVIDIADFED
ELGITFKTFKKADAQSIEENNTLLWAKKIFKTKPNREVSEDLKAKIKTIFHHLTKEELVD
KILANYLAQNATAIPNPEGAKTHKKKKQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacagttttcagatttaggaattaacgaacagctccagcaaagtttaatcgat
ttacaaatttctgaaccgacagacgttcagaaaaaagcgattccggtagttttaaatcag
aaagatgatctcgttgttttagcaaaaacaggtacaggaaaaacagcggcttttggcttg
ccgttattacaattggccaatgtagagaataaagacattcaatctttaatccttacacct
acaagagaattaggccagcagatttacaacaatttacaatctttagcttcaaatagcaca
gaaattaaaatcgtctctttgtgcggaggaacacccataaagccacagattgaagcttta
acaaatcagtctcaaattataattgctacacctggtcgtttggtagatttagttaaacgt
gaagccattaatctgaaaagcataagctattttgtattagatgaagctgatgaaatgata
agtgctttaaaggaagaggtggatgccattataaatgaacttcctaaaaccagaagaacc
ttattatttacagcaaccatgcctggttacataaaacaattggttcaaaattacatgtct
aaacgtgtggtacacatcgaagccgatatggaaacggttggtcatcaaggtatcgatcat
caatatgttgtggtagagcctatagagaaattagaagttttaatgcattttttaaactct
agagaaggcgaacgtggtattattttttgtaaaaccaaggctgctgttaataaattggct
aaaaatttagcgattaataaattttcatcaggagcgttacatggtagtttgtctcaaggt
attcgtgatcgtattatgggacaatttagagatgaacatatcgatattttggttgctacc
gatttagctgctcgtggtattgatgttaaaaacctgtcttacgttgtaaattatcattta
ccagatacttatgatgcctatgtacatagaagtggaagaacggctagagcaggagcgaaa
gggttttctttaaccattttacaggaagaagaagtgattgatattgccgattttgaagat
gaattaggcattacttttaagacctttaaaaaagctgatgctcaaagtattgaagagaat
aatacattgttatgggctaaaaaaatatttaaaaccaaacctaatcgtgaggtttcagaa
gatttaaaagccaagataaaaaccatatttcatcatttaaccaaagaagaacttgttgat
aaaatattagcaaattacttagctcaaaacgccacggcaattccaaatcctgaaggcgct
aaaacgcataaaaagaaaaagcaataa
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