Tamlana sp. s12: JJL45_12640
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Entry
JJL45_12640 CDS
T10518
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tay Tamlana sp. s12
Pathway
tay03030
DNA replication
tay03430
Mismatch repair
tay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JJL45_12640
03430 Mismatch repair
JJL45_12640
03440 Homologous recombination
JJL45_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tay03032
]
JJL45_12640
03400 DNA repair and recombination proteins [BR:
tay03400
]
JJL45_12640
Enzymes [BR:
tay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JJL45_12640
DNA replication proteins [BR:
tay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JJL45_12640
DNA repair and recombination proteins [BR:
tay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JJL45_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
Lgt1_N
Motif
Other DBs
NCBI-ProteinID:
QQY81763
LinkDB
All DBs
Position
2935902..2937239
Genome browser
AA seq
445 aa
AA seq
DB search
MIYTVIDVETTGPSNKITEISIFRYDDAVLVDEFTSLVNPETLIPDYITDLTGIDDYMVS
KAPKFHEIAENILAITQQAVFIAHNVSFDYNVIRNEFKALGVAFNRKKLCTVRLSRKLIP
GHKSYSLGKICQDLGIPIHGRHRAKGDVEATVILFQKLLEQPDAQDVIQVFLKKDAKETK
LPKNLKAETYNQLPKAIGVYYFKDKKDTVIYVGHATDIQKQVLKHFNSKAEKELLLTQET
VDIDFELSGSETIALLMEDAAIKEYNPKYNQVLKRAPKAYGIFSYQDRNGIIHLAFNTLK
AAPSPFHILYSIKTCQQYLEKLCKQFNLCPKYCHLQEGLQECSGYEVQSCKGVCRKTESV
ALYNIRVKQAIEYSKTNSKNMILKQQGRHENENAFIMIKDSLYCGYGFIDKEEQMMTSED
LEPFLIQQNDNVDVQRILRPTLLSV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgatttataccgtaattgacgtagaaactacggggccaagtaataagattactgaaatc
tccatttttagatatgacgatgctgttttagttgatgaatttacaagccttgttaatcca
gaaacattaattccggattatataacagatttaactggaatcgatgattacatggtgtct
aaagcgcctaaattccatgaaattgctgaaaacatcttagccatcacacaacaagcggtg
tttatagctcataatgtgagtttcgactataatgttataagaaacgagtttaaagccctt
ggtgtcgctttcaaccgaaaaaaactatgtaccgtaaggctgtctcgaaaactcataccc
ggacataaatcgtatagtttaggtaaaatatgtcaggatttaggtatccctatacacggc
agacaccgcgcgaaaggcgatgtagaagctacggttattctttttcaaaaattattagag
caaccagatgctcaagatgtcattcaggtatttctgaaaaaagacgctaaagaaactaag
ttgcctaaaaacctgaaagcagaaacttataatcaattaccgaaagccattggggtttac
tattttaaagataaaaaagatactgttatttatgtaggtcatgctaccgacattcaaaaa
caagttttaaagcattttaatagcaaagcagaaaaagagttgcttttaacacaagaaacg
gtcgatatagattttgaactttctggaagtgaaaccattgcattacttatggaagatgct
gccataaaagaatacaaccctaaatacaatcaagtattaaaaagggctcccaaagcctac
ggtatctttagttatcaagaccgcaatggcatcatacatttagcttttaacaccctaaaa
gcagccccctcaccttttcatatcctgtatagcataaaaacatgtcagcaatatttagaa
aaactgtgcaaacagttcaatttatgtcctaaatactgtcatttacaggaaggtcttcaa
gaatgttctggttacgaagttcaatcctgtaaaggtgtttgtagaaaaacagaatcggta
gcactttataatattcgtgttaaacaagctattgaatactccaaaaccaactcaaaaaat
atgatcttaaaacaacaaggcagacatgaaaatgaaaacgcttttatcatgataaaagat
agcttgtattgtggttatgggtttatagataaagaagaacaaatgatgacttcggaagat
ttagaaccttttttaatacagcagaatgataatgttgatgttcaaagaatactacgacct
acgttgttgagtgtatag
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