Tamlana sp. s12: JJL45_15965
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Entry
JJL45_15965 CDS
T10518
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tay Tamlana sp. s12
Pathway
tay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJL45_15965 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tay03019
]
JJL45_15965 (groL)
03110 Chaperones and folding catalysts [BR:
tay03110
]
JJL45_15965 (groL)
03029 Mitochondrial biogenesis [BR:
tay03029
]
JJL45_15965 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tay04147
]
JJL45_15965 (groL)
Enzymes [BR:
tay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JJL45_15965 (groL)
Messenger RNA biogenesis [BR:
tay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JJL45_15965 (groL)
Chaperones and folding catalysts [BR:
tay03110
]
Heat shock proteins
HSP60 / Chaperonin
JJL45_15965 (groL)
Mitochondrial biogenesis [BR:
tay03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JJL45_15965 (groL)
Exosome [BR:
tay04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JJL45_15965 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JJL45_15965 (groL)
Exosomal proteins of breast cancer cells
JJL45_15965 (groL)
Exosomal proteins of colorectal cancer cells
JJL45_15965 (groL)
Exosomal proteins of bladder cancer cells
JJL45_15965 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Phage_connect_1
Motif
Other DBs
NCBI-ProteinID:
QQY82382
LinkDB
All DBs
Position
3713739..3715367
Genome browser
AA seq
542 aa
AA seq
DB search
MAKSIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPSVTKDGVSVAKEIE
LEDEHENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVASGANPMDLKRGID
KAVEAITKDLEDQAQKVGSSSEKIKQVAAISANNDDTIGELIAKAFEKVGKEGVITVEEA
KGMETYVDVVEGMQFDRGYLSPYFVTDSDKMVADLENPYILLFDKKISNLQEILPILEPV
AQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENADLSMLGTAETVTVDKDNTTIVNGSGDGETIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKAVLAKITTDNLDETTGVQIVNKAIEAPLRTIVENAGGEGSVVINKVLEGKKDFGYDA
KSESYVNMLKAGIIDPKKVTRIALENAASVAGMILTTECALIEIKEDAPAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagtataaaatttgatattgaagcacgcgacggtttaaaacgtggtgttgat
gcattagcaaacgctgtaaaagtaactttaggtcctaaaggacgtaatgtcattatttca
aaaagttttggagcaccttctgtaaccaaagatggtgtatcggtagctaaagaaatcgaa
ttagaagacgagcacgaaaacatgggtgctcaaatggtaaaagaagtcgcttcaaaaacc
aacgatttagctggtgacggaacaacaactgctaccgttttagctcaagctatcgtaaaa
gaaggtttaaaaaatgtagcttctggcgctaatccaatggatttaaaacgcggcatcgac
aaagctgttgaggctattactaaagaccttgaagatcaagctcagaaagtaggaagttct
tcagaaaaaatcaaacaagttgctgctatttcagcaaataacgatgatacgataggtgaa
ttaatcgctaaagctttcgaaaaagtaggaaaagaaggtgtgattactgttgaagaagct
aaaggtatggaaacctatgtagacgttgttgaaggtatgcaatttgaccgcggatactta
tcgccttactttgtaaccgattcagacaaaatggttgccgatttagagaatccatacatt
ttattattcgataagaaaatttctaacttacaagagattcttccaattttagagcctgtt
gcacaatctggtcgtcctttattaattattgctgaagatgtagacggacaagctcttgct
actttagtggttaacaaactacgtggtggattaaaaattgctgctgttaaagctcctggt
tttggtgacagacgtaaagctatgttagaagatatcgctattctaactggtggaactgtg
atttctgaagaacgcggatttactttagaaaacgctgatttaagcatgttaggaactgct
gaaacagtaactgtagataaagacaatacaactattgtaaacggttctggagatggtgaa
acgattaaggctcgtgttaaccaaattaaagcacaaatagaaacaacaacttcagattac
gataaagaaaaacttcaagagcgtttagcgaaattggctggcggtgttgctgtactttat
gttggtgctgcaagtgaagttgaaatgaaagagaaaaaagaccgtgttgatgatgcttta
catgctactcgtgctgccgttgaagaaggtattgtagctggtggtggtgttgctttagta
agagcaaaagctgttttagctaaaatcacaaccgataatttagatgaaactacaggtgtt
caaattgtaaataaagcaattgaagcgcctttaagaactattgttgaaaatgctggaggc
gaaggttctgtagttatcaataaagtattagaaggtaaaaaagactttggttacgatgct
aaatctgaatcttacgtaaacatgcttaaagcagggattatcgatcctaaaaaagtaacg
cgtattgctttagaaaatgctgcttctgtagctggaatgatcttaactacagagtgtgct
ttaatcgaaattaaagaagatgctccggcaatgcctccaatgggtggtggtatgccagga
atgatgtaa
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