Leadbettera azotonutricia: TREAZ_0541
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Entry
TREAZ_0541 CDS
T01506
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
taz
Leadbettera azotonutricia
Pathway
taz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREAZ_0541 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taz03019
]
TREAZ_0541 (pnp)
03016 Transfer RNA biogenesis [BR:
taz03016
]
TREAZ_0541 (pnp)
Enzymes [BR:
taz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TREAZ_0541 (pnp)
Messenger RNA biogenesis [BR:
taz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TREAZ_0541 (pnp)
Transfer RNA biogenesis [BR:
taz03016
]
Prokaryotic type
tRNA degradation factors
TREAZ_0541 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
SDH5_plant
KH_2
KH_NusA_1st
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AEF80538
UniProt:
F5YBN5
LinkDB
All DBs
Position
1940929..1943100
Genome browser
AA seq
723 aa
AA seq
DB search
MIQKVTFQIAGQELILETGRIAKQANGSVFAQYAGSAVIATACSSSDAVEGLDYVPLTVD
YNEKYYAAGKIPGGFIKRESRPKDKEILVSRLIDRPMRPLFDKAFGREIQVVPTTLSTDQ
VNPPDILSIIASSAAVHISDIPFGGPIAGVRVCSVDGELVVNPTYEQIEKSTLEIMVAGT
KDGITMVEGGANEVSEDLMIAALEKAHAMIIELCDLQNKLRELAGKPKLPLTTVSFTLDN
KDAIRSAAYPRLEAACFLPTKGERHDGIKAVKTDIASQYAAQLEDENQKKLFDALFEDMQ
YEILRSTILDKGKRVDGRGTEDIRPINCEVGILARTHGSALFTRGETQALAVTTLGTVFD
EQIFDDIDGDKREHFILHYNFPPYSVGEVGRMGTGRREIGHGNLARRSLEAMIPGKDVFP
YTIRVVSEIMESNGSSSMASVCGGTLSMLHAGVPMKKPVAGIAMGLITEGKGGPGDRFAV
LSDILGEEDHLGDMDFKVAGTEDGITGFQMDIKIAGVSPEIMRKALDQAKRGRLHILSIM
NATLAKPVEAISEYAPKIVTLRIDIDKIGALIGPGGKNVKALCEQFGVRINTEDDGTVSI
FGKNTKDAEDAKAAVLGIVLDPEVGRIYNGTVKRIMDFGAFVEILPGKEGLVHISKLSRQ
RVALVTEVVKEGDSIPVKLLEIDRMGRLNLSYIDAIDPQGSSEQTESRPQGGSQGRYNDR
PRR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaaagtaacattccaaattgctggccaggagttgatcctcgaaaccggcaga
atcgcgaaacaggccaatgggtctgtattcgcacagtacgcagggtctgcggttattgcc
acggcctgctcctcatcagacgcagtggagggcctcgactatgtgcccctcacggtggat
tacaacgaaaagtattacgccgcagggaagatccccggcgggtttatcaagcgcgaaagc
cgccccaaagacaaggagattctggtctcccgtctcatcgaccggcccatgaggcccctc
tttgacaaggctttcggtcgtgagattcaggtagtgcctaccacgctttcaacggatcag
gtgaaccctccggacatactttccatcatcgcctcgtcggcggctgtgcacatttcggac
attccctttggcgggcccatcgcgggcgtgcgggtctgttcggttgacggggaacttgtg
gtaaaccccacatacgagcagattgaaaaatccaccctcgaaatcatggttgccggtact
aaagacggtatcaccatggtagaaggcggtgccaacgaggtaagcgaagatctcatgatc
gccgccctcgaaaaagcccacgccatgatcatcgagctttgcgatctccagaataaactc
agggaactggcgggcaagcccaagctgccccttaccacggtttcattcaccttggacaac
aaagacgccatacgttccgcggcctatccacggcttgaagcagcctgtttcctgcctacc
aagggcgagcgccatgacggcatcaaggcggtcaaaacagacattgcctcccaatatgcc
gcccagctcgaagacgaaaaccagaaaaagctgttcgacgccctttttgaggatatgcag
tacgaaatcctccgttccactatcctggacaagggaaagcgtgtagacggaaggggtacc
gaagacataaggcccatcaactgtgaagtgggcatacttgcccgtacccacggttcggct
ctctttacccggggcgaaactcaggctctggcagttaccactctgggcactgtttttgac
gagcagatctttgacgacattgatggggacaagcgggaacatttcatactccactacaac
ttccccccctattcggtgggcgaagttggacgcatgggtacgggccgcagggaaataggc
cacggcaatcttgcccgccgctccctcgaagccatgatccccggcaaggacgtattccct
tacactatccgggtggtttcggaaatcatggaatccaatggttcatcctccatggcctcg
gtctgcggcggaaccctctccatgctccacgccggcgtccccatgaagaagcctgtggca
ggcattgccatgggcctcatcacagaggggaagggcggacccggcgaccgtttcgcggtg
ctctcggacatccttggtgaagaagatcacctgggcgacatggacttcaaagtcgcggga
accgaagacggcatcaccggcttccagatggacatcaagatcgcaggggtatcgcctgag
atcatgaggaaggccctggatcaggcaaagcggggaaggctccatatcctttcgataatg
aacgccacccttgcaaagcctgtggaagctatcagcgaatacgcgcccaagatcgttacc
ctgagaattgacatcgataagatcggcgccctcatcgggccgggtgggaagaatgtcaaa
gccctctgcgagcagttcggcgtaaggatcaacaccgaggacgacggcaccgtcagcatc
ttcggcaagaacaccaaggatgcggaggacgcaaaagccgcagtgctgggcatagtcctg
gatcccgaagtgggaaggatctacaacggtaccgtaaagcgcatcatggacttcggcgcc
tttgtcgaaatactcccgggcaaggaagggctggtgcatatttccaaactttcacgccag
cgggtagccctggttacggaggtggttaaagaaggggactcgattcccgtcaagcttctt
gagattgacagaatgggccgcctcaacctttcgtacatcgatgccatagacccccagggc
agttccgaacaaaccgagagcaggccccagggcggaagccaggggcgatacaacgacagg
cccaggcgctaa
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