Leadbettera azotonutricia: TREAZ_1282
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Entry
TREAZ_1282 CDS
T01506
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
taz
Leadbettera azotonutricia
Pathway
taz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TREAZ_1282 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taz03021
]
TREAZ_1282 (rpoC)
03400 DNA repair and recombination proteins [BR:
taz03400
]
TREAZ_1282 (rpoC)
Enzymes [BR:
taz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TREAZ_1282 (rpoC)
Transcription machinery [BR:
taz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TREAZ_1282 (rpoC)
DNA repair and recombination proteins [BR:
taz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TREAZ_1282 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
RnfC_N
Glyco_transf_92
Motif
Other DBs
NCBI-ProteinID:
AEF80386
UniProt:
F5YG22
LinkDB
All DBs
Position
1120792..1125546
Genome browser
AA seq
1584 aa
AA seq
DB search
MRDIQDFDSINIRLASPEMIRAWSYGEVKKPETINYRTLRPEKDGLFCERIFGTTKEWEC
YCGKFKSIRYKGVICDRCGVEVTHFKVRRERMGHIELAAPVSHIWYYRSVPSRMGLLLDL
PMTALRSVLYYEKYVVIEPGDTDLKKMQLLSEDEYYESQERYGGSFTAGMGAEAVHTLLE
NLDLDKMATELRAKMIEKGAKSDKRLLKRIDIVENFRNSKNKPEWMILKVIPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLQALNAPDIIIRNEKRMLQEAVDALFDNSK
KKRVVKGASNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVITVGPELKMWQCGLPTK
MALELFKPFIMKKLVDKDVVYNIKKAKMLVEQETPEVFAILDEVVKEHPVLLNRAPTLHR
LGIQAFEPVLVEGKAIKLHPLVCHAFNADFDGDQMAVHVPLTQAAQMECWTLMLSARNLL
NPANGKTIVFPSQDMVLGINFLTRIKPKARRPNVDKYIPLEKQYALETRYPEARKASLEK
QNALETQLSVEKEKNEAKYRGLDSAFVAEEKKKDEKKYQDLKDSLAAEKKQYQELETQLV
LARKLALEKNPDLAQNPDLEAKLSQLIPRYTSLDEILMAIEAKSLDWEAVIKIKPVKFPI
WGKIGEEAKPDKDGLIETTPGRLVFNDEMPPEIPFLNYELKDKELRALIENVFSEKGSWI
TVKMLDVIKATGYKYATVFGATIGVDDIIVPVEKAAMIEEANKKVEEIQRHHREGTITQE
ERHINTEVVWTKTNEALTDIMMQTLEKDRDGFNSMYMMANSGARGSRNQIRQLAGMRGLM
QKPSGETIELPIRSNFKEGLSVIEFFISTNGARKGLADTALKTAEAGYLTRRLVDIAQDV
VVNEDDCGTINGVSYSAIKNGEEIVEPLRDRIVGRYTLEQVKHPITKELIVDVNEEITEV
VVKKIEAAGVETVRIRTVLTCEAKHGVCRMCYGRNLATNRSVDIGEAVGTIAAQSIGQPG
TQLTMRTFHTGGAALKISEENRIFFKYPVYVRDVDGAHVELAEEKSENAEGKLEVRKPAH
WLFTRKGFAIINRVMKEFKLESRDELLAENGQRVIRDAPIIKRGNKEILSPENAYAMVLE
KGRSRVLYLIGQDQKIEIRNGSEFVVKKGDVVEADKNIATFDPFSDPIIAEASGTIKYED
IILGTTYEENLDEKTGNSEKQILEFQSENKQPRILIIDDNGNEAASYHLPGGAYLNVDEG
QKISAGRTIAKTLKESGKTMDITSGLPRISELFEARKPKSPAVLAEVSGVVRFKNIVKGK
RVVIIEDAFGKEYKHLIPMSKRILIRDGDTVEAGESLCLGAVNPHDVLHIKGESHLQRYL
MDEIQQVYRVQGVTINDKHIGVIVRQMMRKVEIVKVGDTKFIYGQLVDKYRFHEENHRVM
AQGGQPGVARPVFQGITKASLNIDSFLSAASFQETTRVLTNAAIAGSTDYLRGLKENILI
GHPIPAGTGMKRYRQVKLFDEEQQDLDAYMEEILEKRKLEKAAEAAREDGDFPVDDTDVE
ADSEVDDETDDDAEPEAESTGAEV
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgagggacattcaggattttgacagtattaatatcaggctggcctctccggagatgatt
cgggcatggtcctacggggaagttaaaaagcccgagaccatcaattaccgtaccctcagg
ccggagaaagacggccttttctgcgagaggatcttcggcactaccaaggagtgggagtgc
tactgcggaaagtttaaatccatacgctataagggcgtcatttgcgaccgctgcggcgtt
gaagtaacccatttcaaagtccgccgcgaacgcatgggccatattgaactggccgcccct
gtttcgcacatttggtactaccgctcggttcccagccgtatgggccttttgctggatctt
cccatgaccgccctccgttcggtgctctattatgaaaagtacgtggtcattgagccgggc
gacacggatcttaaaaagatgcagcttctttcggaagatgaatactacgaatcacaggaa
cgctacggcggcagctttaccgcaggaatgggcgcggaagcagtgcacaccctcctggaa
aacctcgacctcgacaagatggcaacagaattgcgggccaagatgatcgagaagggcgcc
aagagcgacaagcgccttcttaagcgcattgatattgtcgagaatttcaggaattccaag
aacaagcccgagtggatgatccttaaagtgattcctgtaattccccctgagctgcgcccc
atggtgcagctcgacggcggccgctttgcaacctcggacctcaacgatctctaccgcagg
gtgataaaccggaacaaccgcctcaagaggctccaggccctgaacgccccggacatcatt
atccgcaacgagaagcgcatgcttcaggaagcggtggatgcccttttcgataattccaaa
aagaagcgggtggtgaagggcgcttccaacaggcccttaaagtccatcagcgatatgctt
aaaggcaagcagggccgtttcaggcagaaccttctcggcaaacgcgttgactattcaggc
cgcagcgttattactgtgggccctgaacttaaaatgtggcagtgcggtcttccaaccaag
atggcgctggaactcttcaagcccttcattatgaagaagcttgttgataaagacgtggtc
tacaatatcaaaaaggccaagatgctggttgagcaggagacccccgaggtcttcgccata
ctcgacgaagtagtaaaagagcaccctgtgcttctgaaccgggcgcctacgctccaccgc
cttgggattcaggctttcgagccggtgcttgtggaagggaaagcaataaaactgcacccc
ctggtatgccacgcattcaacgccgatttcgacggcgatcaaatggcggtccacgtgccc
ctgacccaggctgcgcagatggaatgctggaccctcatgctttccgcgcggaatctcctc
aaccctgccaacggcaagactattgtgttcccttcgcaggacatggtgctgggcataaac
ttccttacaaggatcaagcccaaggcccggcggccgaatgtggacaagtatattccgttg
gaaaagcagtacgctctggagacacggtaccccgaggcgcgtaaggcgagtctggaaaag
cagaatgccctggagacacagctttctgtggaaaaggaaaagaacgaggcaaaatatcgg
ggactggatagcgcgttcgttgcagaagagaagaagaaggatgaaaaaaagtaccaggat
ctgaaagattcgctggctgcggaaaagaaacagtaccaggaattggaaacccagcttgtc
cttgcaaggaagcttgccctggaaaagaatcccgatctggcgcaaaatcccgatttggaa
gcaaagcttagccagctcatcccccgctatacatccctggacgaaatacttatggccata
gaagccaagtcccttgattgggaagcggtaatcaagataaagcccgttaaattccccatt
tggggcaagattggcgaggaagccaaacccgacaaagacggccttatcgaaaccaccccc
ggacgcctcgtgtttaacgatgagatgcccccggagatccccttcctcaactacgagttg
aaagacaaggagctcagggcccttatcgaaaatgtcttcagcgaaaaaggctcctggata
acagtaaaaatgctggatgtcatcaaggcaacaggctataaatatgccacagtcttcggg
gcgacaatcggggtggacgacattatagtgcctgtcgaaaaggcggccatgatcgaagag
gccaacaagaaagttgaagaaatccagcggcatcaccgcgaaggcactatcacccaggaa
gagcgccacatcaacacggaagtggtgtggaccaagaccaatgaagcccttaccgacatt
atgatgcagaccctggaaaaagacagggatggcttcaactccatgtatatgatggcaaac
tcgggcgcccggggctcccgcaaccaaatacgccagcttgcaggcatgcgcggtcttatg
caaaagccctcgggcgaaaccattgaacttcccatcaggtcgaacttcaaagaagggctt
tcggtcattgaattctttatttctactaacggcgctcgcaagggccttgccgatacagcc
ctcaagaccgccgaggcaggctaccttacccgccgccttgttgacattgcccaggatgtg
gtggtcaacgaggacgactgcggaaccatcaatggagtctcttattcggcgatcaaaaac
ggcgaagagattgtcgagcctttgagggaccgcatagtggggcgctatacccttgaacag
gtaaagcatcccataaccaaggaactcatcgtcgatgtaaacgaggaaatcaccgaagtc
gttgtcaaaaagatcgaagcggcaggggtggaaactgtgcgcatcaggacggttcttacc
tgcgaggccaagcatggcgtttgccgcatgtgctacgggcgcaaccttgccacaaaccgt
tcggttgacataggcgaagcggtaggcactatcgctgcgcagtccatcggccagcccggt
acccagctcaccatgcgtactttccatacaggcggggccgcattaaagatcagcgaagaa
aaccgtatcttctttaagtaccctgtgtatgtgcgcgatgtggacggcgcccatgtggag
cttgcggaagagaaatccgagaatgcggagggcaaacttgaagtcaggaagcccgcccat
tggctcttcacccgcaaaggcttcgccataatcaacagggtaatgaaggaattcaagctc
gaatccagggacgaactcctggctgaaaatggccagcgggttatccgcgatgcgcctatc
atcaagcggggcaataaagagatcctctctcccgaaaatgcctatgccatggtattggaa
aaaggcaggagcagggtcctttatcttattgggcaggatcagaagattgaaatccgcaac
ggttccgaattcgtggtcaagaaaggcgacgtggttgaagccgacaagaatattgcgact
ttcgaccccttctccgacccgatcattgcggaggcctcgggtactattaaatatgaggat
atcattctcggcactacgtacgaagagaatcttgacgagaaaacagggaacagcgaaaag
cagatcctggaattccagtccgaaaacaaacagcccaggatcctcattattgatgataac
ggcaatgaggctgcttcttaccatctccccggcggcgcctaccttaatgtggacgaaggc
cagaagatcagcgcgggccgtactattgccaagacccttaaggaatccggcaagaccatg
gacatcacttcgggccttccccggatttccgagctcttcgaagcgcgcaagcccaagagc
cccgcagtccttgcggaggtttccggcgtagtgcgcttcaagaacattgtgaagggcaag
cgtgtcgtgatcatcgaggatgcctttggcaaggaatacaaacaccttatccccatgagc
aaacggatcctcatacgcgatggcgatactgtggaagcaggcgaaagcctttgccttggc
gcagtcaatccccacgatgtgcttcatattaaaggtgaaagccatctccagcgctacctc
atggacgagatacagcaggtctaccgtgtccagggtgttaccatcaacgataaacacatc
ggcgtcattgtgcgccaaatgatgcgcaaggtagaaattgtaaaggtaggggacaccaag
ttcatttatgggcagctcgtagacaagtaccgcttccacgaagagaaccatcgggtcatg
gcgcagggcgggcagcccggagtggcgcgacctgttttccagggaatcaccaaggcttcg
ctcaacatagactctttcctctcggcggcaagcttccaggaaaccaccagggtactcacc
aatgctgcgatagcagggtcaaccgattacctccggggcctcaaggagaacatcctcatc
ggccatcccatacccgcaggtaccggcatgaagcgctaccgccaggtgaagctcttcgac
gaggaacagcaggatcttgatgcctacatggaagaaatcctcgaaaagcgcaagcttgaa
aaagcagctgaggccgcccgcgaggacggagacttccccgttgatgacaccgatgttgag
gctgattccgaagtcgatgacgaaaccgacgacgatgccgaaccggaagccgaaagcacc
ggagctgaagtataa
DBGET
integrated database retrieval system
