Leadbettera azotonutricia: TREAZ_1299
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Entry
TREAZ_1299 CDS
T01506
Name
(GenBank) ribonuclease II family protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
taz
Leadbettera azotonutricia
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
taz03016
]
TREAZ_1299
Enzymes [BR:
taz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TREAZ_1299
Transfer RNA biogenesis [BR:
taz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TREAZ_1299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AEF81542
UniProt:
F5YG07
LinkDB
All DBs
Position
1103937..1105910
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AA seq
657 aa
AA seq
DB search
MIAEKSLVIYKSKPALVVAAGDKIDISVLGGEKLKVREKDIELIHPGPCTLAELNTEALS
RLLAAGDAKGAWELLEGGGDVPLRELAELVYGEFTPTAAWAAYSLILDGLYFTGNAGAVK
PRPSSEVEADEKKRGEKQREADERAAFFERLKKAAAPGADGSQAHTLSGDVQPENPLVEG
DRRYLQDVEALALGRTDKSRTLKELGRSETPQEAHRLLLAAGVWTVWDNPHPSRFGLSLQ
SAKIIPDPAPDEDRLDLTHLKSYAIDNAWSDDPDDAVSLEGPETSAELRSSEGSPTDSQG
RLVLWVHVADPAASIKPGSPADLEARGRGATLYVPEGSARMLAPEALPLFALGLGADGIC
PALSFKIVLNAAFSIVETEIIPSKVKVTRLTYEEADNLEGGELAGLFALAARNTERRLDT
GAILIDLPDAHIHVHLDKIISQNKVSVEALVPRKSADMVRECMVLAGEGAARWALRNKVP
FPFVGQEAGELPEERLAGLAGAFQLRRCMRPRTLSAKPAIHWGLGLDEYTQVTSPLRRYT
DLLCHQQIRAFLKGEALLSEEEILLRVGAAEAAAFAAGRAERASKAHWMGVYLLDKKGSE
WEAIVLDKKGGKAVASIPALGLETQVGLKGDVGPNDSITLACGSARIPEGEVNFTVL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgaaaaaagcctcgtcatatataaatccaaacctgccctggttgtagcggca
ggcgataaaatagacatctctgtccttggcggcgaaaagctcaaagtccgcgagaaggat
atcgagcttatccatcccggcccctgcaccctggctgaactcaacaccgaagccctaagc
cgcctattggcagcaggggatgcaaaaggcgcctgggaactgctcgagggagggggagat
gttcccctcagggaattggccgagttggtttatggcgaatttacacccaccgcggcctgg
gcggcgtatagcctcatcctggacggcctctattttacagggaatgccggggccgtaaaa
cccaggccttcctccgaggttgaggctgatgaaaaaaagcggggcgaaaagcagagggag
gctgacgagcgggcggcgttttttgagaggcttaaaaaagcagctgcccccggggctgat
ggttcgcaggcacataccctatccggggacgtgcagccggaaaatcctttggtcgagggc
gacaggcgctacctgcaggatgtggaagccctggccctgggtaggaccgacaagagccgc
actttaaaggaattgggcaggagcgagaccccccaggaggctcacaggctgctccttgcc
gcaggggtatggacagtgtgggacaatccccaccccagccgcttcgggctttcgcttcaa
tccgcaaagatcattcccgatcctgcccccgacgaggacaggctggatcttacccatctt
aaatcctatgccatagacaatgcctggagcgacgatcctgacgacgcggtttctctggaa
gggccggaaacctcagccgagctgcgtagcagcgaaggttcccctactgacagccagggg
cggcttgtcctttgggttcatgtggccgatcctgcagccagcataaagcccggcagtcct
gcggatctcgaagcccggggcaggggcgctactctgtatgtccccgaaggcagcgccagg
atgctggcccccgaggcccttcccttgtttgccctggggcttggcgctgatgggatttgc
cctgccctttccttcaaaatcgtgcttaatgcggccttttccattgtggagactgaaata
attccctcaaaagtgaaggtgacgcgcctcacgtatgaagaggccgataatcttgagggc
ggggaactggccggcctttttgccctggctgcgcgcaacacggaacggcggctggatacg
ggggccatactcatcgatctgcccgatgcccatatccatgtgcatcttgataaaatcatt
tcgcaaaacaaagtttctgttgaagccctcgtcccccgcaaatccgctgacatggtcagg
gagtgcatggttctggcaggggagggggcggcccgctgggctttgcggaacaaggttcct
ttccccttcgtcgggcaggaagcgggggagcttcccgaggagcggcttgcaggtttggcc
ggggctttccagctcaggcggtgcatgaggccccggacgctttcggccaagcctgcgatc
cattggggcctggggcttgacgagtacacccaggtcaccagccccctgcgccgttacacc
gaccttctttgccaccagcagattagggcttttctcaagggcgaggctttgctttccgag
gaggaaatactcctcagagtgggcgctgcggaggcggcggctttcgcggccggcagggcc
gagcgggcatcgaaggcccactggatgggggtctatcttctggacaaaaaaggctctgaa
tgggaagccatagtgctggataaaaagggcggcaaagcggtagcaagcatccccgccctg
ggtcttgaaacccaggtgggccttaaaggggatgtcgggcccaatgattccataaccctc
gcttgcggctctgcaaggatacccgagggggaggtcaattttactgttttatag
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