Leadbettera azotonutricia: TREAZ_1314
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Entry
TREAZ_1314 CDS
T01506
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
taz
Leadbettera azotonutricia
Pathway
taz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREAZ_1314 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taz03019
]
TREAZ_1314 (recQ)
03400 DNA repair and recombination proteins [BR:
taz03400
]
TREAZ_1314 (recQ)
Enzymes [BR:
taz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TREAZ_1314 (recQ)
Messenger RNA biogenesis [BR:
taz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TREAZ_1314 (recQ)
DNA repair and recombination proteins [BR:
taz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TREAZ_1314 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AEF80191
UniProt:
F5YFZ3
LinkDB
All DBs
Position
1088172..1090130
Genome browser
AA seq
652 aa
AA seq
DB search
MALSKHKVLEDFFGFKSFRPGQEETIDAVLAGRDVLAIMPTGAGKSLCYQIPALMLPGLT
IVISPLISLMKDQVEGLKDSGVQAACLNSSISPAEYNETMDSILAGKLKLLYIAPERLQR
AELPRFAAGQGIPLVVVDEAHCLSQWGHDFRQSYLDIAGFIKSIKPKPVTAAFTATATPK
VREDIITLLRLKETNDDKGAFIITTGFDRPNLYFEVQKPGKNGCASKDKNTALLDCLKTR
TDKSGIIYCATRKAVEEVWDLLLRRGFGVTRYHAGLGDAERKKNQDDFLYDRKPIIVATN
ALGMGIDKSNVSFVIHYNMPKNIESYYQEAGRAGRDGAPADCILLYSGQDVKINEFLIAR
SDEESNESNPDLVEHNLELLKQMTYYATGNGCLRQRLLSYFDEQSQGYCGNCSNCLTAFD
EVDISLEARKIISCVYRLKQRNRAFGKVMIIDILKGSRSEKVVSQGFDTLSTWGIMREAS
AHRIRAILDWLVEEGYLLQSAGEYPVIEMGIKAGDFLKGSKPLMMMLAKEAPPREIPFRE
KAKAAEKPGAWENADAGVRTKTEESLAESSFDEALFAKLKELRRQLAAKEGFPAYIVFSD
ASLRDMCRKLPKTLEEFPGVSGVGQVKTGKYGLPFTSLIREHCSANAEPDEN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagcaagcataaggtactggaagatttttttggctttaaatccttccgccca
ggccaggaagaaaccatagatgccgtactcgcaggcagggatgttcttgcgataatgccc
accggggcgggcaagtccctctgttatcagataccggcccttatgcttccggggctgacc
atcgtaatatccccccttatttcattaatgaaagatcaggtcgagggccttaaagattca
ggcgtccaggctgcctgccttaacagttcaatcagccctgctgaatacaacgaaaccatg
gacagcatccttgcaggaaaactcaagctcctctatattgcacccgaacggcttcagagg
gccgagctgccccgttttgcggcagggcagggcataccccttgtggtggtggacgaagcc
cattgcctgtcccagtggggccatgatttcaggcagagctatctggatatcgcgggtttt
atcaaaagcataaagcccaagccggttaccgccgcattcaccgccaccgctacgccaaaa
gtgcgtgaagatataataacacttttgcgcttaaaagagactaatgatgacaagggcgct
ttcatcattaccactggttttgatcgccccaatctttattttgaagtgcaaaaacccggc
aagaacggatgcgcctcaaaagacaaaaacactgccctcctggactgcctgaaaaccagg
accgataaaagcggcatcatctactgcgcaaccaggaaagcagtggaagaagtgtgggat
cttctcttaaggcggggcttcggtgtcacccggtaccatgcaggacttggcgatgcggag
cggaagaaaaaccaggatgactttctctatgaccgcaagcccatcatcgtcgcaaccaac
gctcttggcatgggcattgataaatccaatgtttcctttgtgattcactacaacatgccc
aaaaacatcgaaagctattaccaggaagcaggaagggcgggtcgtgacggcgcccccgca
gactgcatacttctttacagcggacaggatgtaaaaataaacgagttccttattgccaga
agcgacgaggaaagcaatgaatcgaaccccgatctggtagagcacaaccttgaactcctc
aagcaaatgacctactacgctacggggaatggctgcctccgccaaaggctgctttcatat
ttcgatgagcaatcacagggttattgcggaaactgttccaactgcctcactgctttcgac
gaggtagatatcagcctcgaagccagaaaaattatttcctgcgtatacaggcttaagcag
cggaacagggcttttggcaaggtcatgatcatcgatatattgaaaggcagcagaagcgaa
aaagtagtttcccagggtttcgataccctcagcacctgggggatcatgcgggaggcttcc
gcccatagaatccgcgccatactagactggcttgtcgaagaaggctatctccttcaaagc
gccggggagtatccggtaatagagatgggaatcaaggcgggggattttcttaaagggagc
aagccgctcatgatgatgcttgccaaagaagcccctccccgggaaatccctttccgggaa
aaagcaaaggcggcggaaaagcccggggcctgggaaaacgcggatgcaggtgtacgcaca
aaaactgaagaaagccttgcggaaagctcctttgacgaagccctcttcgcaaaactcaaa
gagctgcgcagacagcttgccgccaaagaaggcttccccgcctatattgttttttccgac
gcttccctgcgggacatgtgcaggaagctgcccaaaacccttgaggaattccccggggtg
agcggggtagggcaggtaaagacagggaaatacggcctaccctttaccagtttgatacgg
gaacattgttccgccaatgcggaacctgatgaaaattaa
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