Leadbettera azotonutricia: TREAZ_2693
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Entry
TREAZ_2693 CDS
T01506
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
taz
Leadbettera azotonutricia
Pathway
taz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREAZ_2693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taz03019
]
TREAZ_2693
Enzymes [BR:
taz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TREAZ_2693
Messenger RNA biogenesis [BR:
taz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TREAZ_2693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEF82782
UniProt:
F5YDS1
LinkDB
All DBs
Position
3516273..3518060
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AA seq
595 aa
AA seq
DB search
MIHYMEFTELQLHPELQKGINEAGYITCMPVQEQVLANAFNGQDLYVQSQTGTGKTAAFL
IVIFQRLLSESVINGKKAIIMVPTRELAVQVEEEAKVIGKYLPFKIGSFYGGVGYAQQQQ
ALRDGAQILVGTPGRVLDLNQSGQMNLMDIAFLVIDEADRMFDMGFYPDLRKLIKVVPPA
DRRQTMLFSATLNAWVKNLAWEYTKTPFEIEIAPETVTVEEVEQVLYHVPSENKMRLLMG
IMQRERPESAIIFCNTKRYTEIVAKRMKLNGYDCEFIMGDLPQAKRLKIIDDIKAGKLRF
LVATDVAARGLDIEDLSLVVNYDLPNESENYVHRIGRTARAGKTGKAITFASEQDIYELP
SIEKYIGKKIPSETAVEELYAEDKSEGVRIHADFYEDRGGGRDKGRRDGRRDGRKPEGRQ
SGREHERPRNGERRPGEHKSGEHRPAEHLPGGSTEGRREYPPHAPRERRDNQKAPAAQGG
SPAQAAQGGEDISKLSFDERMAFYKNKYDQGKGRKQGQPKSGNQQRGKARPGGGQQQAAQ
PRAGNQRSNTGKAPRENHKEAPRGTQANPPQQASPEPSQKKGILSKIFGIFKKKN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgatacactatatggaatttaccgaactacaattgcaccctgaactgcaaaagggcatc
aatgaggcaggatacatcacctgcatgcccgttcaggaacaggttctcgccaatgccttc
aacggccaggacctttatgtacagtcccagacagggacaggaaaaaccgccgcattttta
atcgtcatctttcagcggctcctttctgaatccgtcatcaacgggaaaaaagcgatcatc
atggttcccaccagggagcttgctgtgcaggttgaagaagaggccaaggttattggaaaa
tacctccccttcaaaatcgggagcttctacggcggcgtgggctatgcccagcagcagcag
gccctgcgggacggcgcccagatcctcgtgggcaccccggggcgcgtgctggatctgaac
cagtcgggccagatgaacctcatggacattgccttcctcgtgatcgacgaagccgaccgc
atgttcgacatgggcttttaccctgatctgcgaaagctcatcaaggtggtgccccctgcc
gaccggcgccagaccatgctcttcagcgccaccctcaatgcctgggtaaagaacctggcc
tgggaatacacaaaaactcccttcgaaattgaaatcgccccggagactgtcactgtagaa
gaagtcgaacaggtcctctaccatgtcccttcggaaaacaaaatgcgcctccttatgggg
atcatgcagcgcgaacggcccgaaagcgccatcattttttgcaacacaaagcgctacacc
gagattgtcgcgaagcgcatgaagctaaacggatatgattgcgaattcatcatgggcgat
ctcccccaggcaaagcgcctgaagattattgacgacataaaagcaggaaaattgcgtttt
ctcgtggctactgatgtagcagccaggggcctcgacatcgaggacctctcattggtggtg
aattacgatctgcccaatgaatccgaaaattacgtccaccggattggccgcacagccagg
gcaggcaagaccggcaaggccatcaccttcgccagcgagcaggacatttacgaacttcct
tccatagaaaaatacataggcaagaagatcccttccgaaaccgcagtggaagaattgtac
gccgaagacaaaagcgaaggtgtgcgcattcatgctgatttctatgaagaccggggcggt
ggcagagacaagggacgcagggacggacgccgcgacggcagaaagcccgagggccgccag
tcaggcagggaacacgaaaggccccgcaatggagaacgccgcccaggtgagcataaaagc
ggcgaacaccgtccggctgaacatcttccgggcggctcaaccgaaggccggcgggaatat
cccccccacgcaccgcgcgagaggcgcgacaaccagaaggcgcctgctgctcaaggcgga
agcccggcacaagcagcgcaaggcggcgaagatatttccaagctctcctttgacgagcgc
atggctttctacaagaataaatatgatcagggcaaaggcaggaagcaaggccagcccaaa
tccggaaaccagcaaagaggcaaggcacggccaggcggcgggcagcagcaagcggcccag
cccagggccgggaatcagcgcagcaataccggcaaagctccacgggaaaatcataaagaa
gctccacgggggactcaggccaatccgcctcagcaggcaagcccggaaccaagccaaaag
aaagggatactgtcaaaaatttttggcatcttcaaaaagaaaaactaa
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