Leadbettera azotonutricia: TREAZ_3101
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Entry
TREAZ_3101 CDS
T01506
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taz
Leadbettera azotonutricia
Pathway
taz03030
DNA replication
taz03430
Mismatch repair
taz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TREAZ_3101
03430 Mismatch repair
TREAZ_3101
03440 Homologous recombination
TREAZ_3101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taz03032
]
TREAZ_3101
03400 DNA repair and recombination proteins [BR:
taz03400
]
TREAZ_3101
Enzymes [BR:
taz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TREAZ_3101
DNA replication proteins [BR:
taz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TREAZ_3101
DNA repair and recombination proteins [BR:
taz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TREAZ_3101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
Herpes_UL17
Motif
Other DBs
NCBI-ProteinID:
AEF82175
UniProt:
F5YAG9
LinkDB
All DBs
Position
3086160..3090185
Genome browser
AA seq
1341 aa
AA seq
DB search
MTDFVHLHVHSDFSLLDGAASVEGLAKKAASLEMKHLAITDHGNMFGVLKFVNACLGDKD
HPLKNREAVHPIIGCEFYMAPGSRHERKGSENGNKYYHLVLLSTCEEGYRNLMKLSSLSY
TEGFYYKPRIDRELLEKYHKGLICLSACLAGEIPSLIMNGQLKEAEKSARWFASLMGEDN
FYLELQDHGIEAQRQVNPIVAGIARRTGIPLVATNDIHYLERADSVVQDILLCIGTNSKR
GDERRMRFEGEEFYFKTGDEMAALFPEYPEAIANTVRIAERCKTEIPTPGPLLPDFEIPA
GFSNADEYLRHLTMDGLEKRYPGRMAEVIERAEYELGVIIKMGFPGYFLIVADFINWAKE
RNIPVGPGRGSGAGSIVAYALRITNNDPLKYNLLFERFLNPERISMPDFDVDFTSEGRAD
VIEYVTQKYGKEKVGQIITFGTLKAKAAIKDVARALDISIDESNMITKLIPDKNPEDPQK
DVTLKVAFAYEPRLRELEQDPRYQELFAMARKLEGKNRNSSIHASGVVIGKTDLTDYVPL
YMDKDGAVASQYTMDLIEPQGLVKMDFLGLKTLDLIDHSVKLIHRRGGKDAAFDIEKISE
TGTAESDAVFKMLGEGRSYGIFQFESEGMQKTLKDAKPASIKELTALNALYRPGPMEYIQ
QFIAAKWGRTPIVYPDPSLESILKETYGVIVYQEQVMKVAQIIAGYTLGQADILRKAMGK
KKRDILDREKVPFIAGAVKQGFTEADADRIFEIMAPFAGYGFNKSHAAAYAVLAYQTAYL
KANFPVEFMAANMTNEISSTDKLPLYIDEARRMGITIDPPDINRSDRLFSVVEGRIVYGF
LGIKGLGVPSAEEIISCRKNGPYKNFMDFLSRVDIKTVGKKNIEILIQTGAFDCFGVGRA
TLLGNLEKTVEYTQSIKDDKKFGQVSLFGETGEKDYPDFTFEVFPEMSGGDKLKTEKELI
GFYFSGHPMDEYKEVWKRIVKVDLGKPESLPAGNCTLVGLIKNIKPITTSKGAKMAFASI
ADYNGEIEITFFADAWEKCRDKIAADQVAILRGKIEYQKDKDRHSFLAEDTIDPLNAEAA
AKQEETQSLKWNKYRNIWKYAKELDLKILDTRSALKATKGNYTIIGSLKSLRTHTDKKGN
EMAFGTLQDERGEIDLVFFARDWKNCKPLAAVDEIAALNGGMDPAADRDPAKPSFKVTSF
QDINKLVRAAAKKAAADNTMKNENTITTQEDADQDGRSFLDSESEGTTETDSAASDSAVI
ARSAFSIREVHVRLRGSAAEKEEALYPLLNYVKENPGSCTLLIHVPAAEGETVIRTATGI
VASASMDVLAHCSAVAEAWSV
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgacagattttgttcatctgcatgtccattctgacttttccctcctggacggcgccgcc
tcggtagaaggcctggcgaaaaaggccgcatccctggagatgaagcaccttgccattacc
gaccacggcaatatgttcggggtgctgaaattcgtgaacgcatgccttggcgacaaggat
cacccccttaaaaaccgggaagcggtgcatcccatcataggctgcgaattctacatggcc
ccaggctcccggcacgagcgcaagggcagcgaaaacggcaacaaatactaccatctggtg
ctcctctcgacctgcgaagagggttaccggaatttaatgaagctttcttccctttcctat
accgaaggtttctattataagccccggatagacagggagctattggagaaataccataag
gggctcatctgcctttcagcctgcctggcaggggaaattcccagcctgattatgaacggg
cagcttaaggaggcggaaaaaagcgcccgctggttcgcatcccttatgggggaggacaat
ttttatctggaactccaggatcacgggattgaggcccagcgccaggtgaaccccatagtc
gccggtattgcccggcgcaccggcatacccctggtggcaaccaacgacatccactatctg
gaacgggcggattcagtggttcaggacatactcctctgcattggcaccaactcaaaaagg
ggcgatgaaaggcgcatgcgctttgaaggggaagagttttacttcaaaaccggagacgaa
atggccgccctgttccccgaataccccgaggccatcgccaacacggtgcggatcgccgaa
cggtgcaagaccgagatccccaccccaggccccctgctcccggatttcgaaatccccgcc
gggttttcaaacgctgatgaatacctgcggcatctcaccatggacgggctggaaaaacgc
tatcccggccggatggcagaggttatcgagcgggctgaatacgagcttggggtaattatc
aaaatgggtttccccggctacttcctcattgtggccgactttatcaattgggccaaggaa
cgcaatatcccggtagggccggggcgaggatccggcgcagggtccatcgtggcatatgcc
ctgcggatcaccaacaacgatcccctcaagtacaacctgctttttgagcgcttcctcaat
cccgagcggatctccatgcccgactttgatgtggactttaccagcgaaggccgggcagat
gtaatcgagtatgtaacccaaaaatacggcaaggaaaaggtggggcagattatcaccttt
ggaaccctcaaagccaaggcagccatcaaggatgttgcccgggcgctggatatcagcatt
gacgaatccaacatgataaccaagcttatcccggataaaaaccctgaagatccccaaaag
gatgttacccttaaagttgcctttgcctacgaacccagattgagggagctggaacaggat
ccgcgataccaggaacttttcgccatggcccgcaagcttgaggggaaaaaccgcaattcc
agcattcacgcatcaggggtggtcattggcaaaactgatttgaccgactatgtgcccctt
tatatggataaagacggcgccgtggcgagccagtacaccatggatctgattgaaccgcag
ggcttggtcaaaatggattttctggggctaaaaaccctggaccttatagaccattcggtg
aagctcatccaccgccggggcgggaaggacgcagccttcgacattgaaaaaatctccgag
accggaacagcagaatctgacgcggtctttaagatgctgggggaaggaagaagctatggg
atattccagtttgaatccgaggggatgcaaaagaccctgaaggacgcaaagcctgccagt
atcaaagagcttactgccctcaatgccctctataggccgggtcctatggagtatattcaa
cagttcatcgccgcgaaatggggccgcacgcccattgtgtacccggatccaagcctggag
agcatcctgaaggaaacctatggtgtcatagtctaccaggaacaggtaatgaaggtagcc
cagatcatcgcagggtacaccctggggcaggcggatatactccgcaaagccatggggaaa
aagaagcgggacattctggacagggaaaaagtgccctttattgccggggctgtaaaacag
ggttttacagaagcagacgcggatcgtatctttgaaatcatggcgcccttcgccggttac
ggcttcaacaaaagccatgccgcggcctatgcggtgcttgcctaccagacagcctacctt
aaggctaatttcccggtggaattcatggcagccaacatgaccaatgaaatttccagcacc
gacaaactccccctgtatatcgacgaagcccggcggatgggcatcaccattgacccccct
gacatcaaccgttcggaccggctgttttccgtggtagaaggccgcatagtgtatggcttt
ttgggcatcaagggcctgggagtgccttctgccgaagaaattatcagttgccggaaaaat
ggcccatacaagaattttatggacttcctcagccgggttgatattaaaactgtgggcaaa
aaaaatattgaaatcctcattcaaaccggcgcttttgactgttttggggttggcagagcc
acactcctgggcaacctcgaaaaaacagttgaatatacccaaagcatcaaggatgataaa
aaattcggccaggtaagcctttttggggaaaccggggaaaaagattaccctgattttaca
ttcgaagttttcccggaaatgagcggcggcgacaagcttaaaacagaaaaagaactaatc
ggcttttatttttccggccaccccatggatgaatataaagaagtatggaaacgcattgtt
aaagtcgatcttggaaaacccgaaagccttcccgccggaaactgtaccctggtggggcta
ataaaaaacattaagcccattactacttccaaaggcgccaagatggcctttgcatctatc
gctgactacaatggagaaattgaaattaccttcttcgcggacgcatgggaaaaatgcaga
gacaagattgctgcggatcaggtagcaatactgcggggaaagatagaataccagaaagac
aaggatcgccacagctttttagccgaggataccatagatcccctgaacgccgaggccgct
gccaaacaggaagaaacccagagcctcaaatggaacaagtaccggaacatttggaaatat
gcaaaagaactggacttgaaaatcctcgacacccggagtgcccttaaagcaacaaagggg
aattacaccattatagggtctcttaaatccctcaggacccatacagacaaaaaaggcaat
gagatggcctttggaaccctccaggatgagcgaggagaaattgatttggtcttctttgcc
cgggactggaagaactgcaaacccctggccgcagtggatgaaatagctgcccttaacgga
ggtatggaccccgcagctgacagggaccctgcaaaacccagcttcaaagttaccagtttt
caggatatcaacaagctcgtaagggcggccgcaaaaaaggcggccgcggacaatacaatg
aaaaatgaaaacaccataacaacccaggaagatgcggatcaggatggccgatctttcctg
gacagcgaaagcgaaggcacaaccgagactgattctgctgcatctgattcagctgtaatt
gcccgcagcgcattttcaatacgggaggtgcacgtgcggctccgaggttctgctgccgaa
aaggaggaagccctctaccccctcctcaattatgtgaaagaaaaccccggtagctgcacg
ctccttatccatgtcccagcggcagaaggggagacagtgatacgcactgccacggggatc
gttgcttccgcttcgatggatgtcctggcacattgcagtgcagttgccgaagcatggagc
gtataa
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