Leadbettera azotonutricia: TREAZ_3441
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Entry
TREAZ_3441 CDS
T01506
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
taz
Leadbettera azotonutricia
Pathway
taz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TREAZ_3441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taz03021
]
TREAZ_3441
Transcription machinery [BR:
taz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TREAZ_3441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AEF81731
UniProt:
F5Y7S6
LinkDB
All DBs
Position
2739440..2740318
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AA seq
292 aa
AA seq
DB search
MTKQMAKKTARVKRINSDENTLSLYLKEISHIPLLTREEEDEVARKAAQGSMAARNKLVS
ANLRFVVNVAKKFQGQGLPLPDLISEGNLGLMHAIERYDVDKGYHFISYAVWWIRQSIFK
AVREKSRMIRLPSNKANEVIQVERARDKVRGNQSHESELREIAGILDMDASHVDEILNIS
RDMVSLDNPVSIENDSATIGDFVEDDKYIAPEEHAVTSALQGDIETLLGSLNHREAEVLR
FRYGLMEGGPMSLKEIGDHFNLTKERIRQIENNAITRLRTPSRRRVLANYVA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaaatggcaaaaaaaacggctcgggttaagaggatcaattctgacgaaaat
actctttctctttatttaaaagagattagccatatccctcttttgaccagggaagaagag
gacgaggttgccaggaaagctgcacagggcagcatggctgccaggaacaagctggtcagc
gccaacctccgctttgtagtcaatgtggcaaagaaattccagggccagggcctgcccctc
ccggatcttatcagtgaaggcaatctcggacttatgcacgccatcgagcgttatgacgtt
gacaagggctatcactttatttcctatgcggtctggtggatacgccagtccatatttaag
gctgtccgcgaaaaatccaggatgatcaggctgccctccaacaaggccaacgaagtgatc
caggttgaaagggccagggataaggtccggggcaaccagagccacgaaagcgagctcagg
gaaatcgccggcatcctcgacatggatgccagccatgtggacgagatcctcaatatttcc
cgtgacatggtgtcgctcgataaccctgtgagcattgaaaatgactcggctaccattggg
gatttcgttgaagacgacaaatacatagcccccgaggagcacgcggtaacaagcgccctc
cagggcgatattgagaccctgctgggaagccttaaccacagggaagcggaagtcctccgt
ttccgctacggcttgatggaaggcggccccatgtcccttaaggaaatcggcgaccacttc
aaccttacaaaagagcggatacgccagattgaaaacaacgccatcacaaggcttcggacc
ccctcccgccggcgggtgcttgcaaactatgtagcctaa
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