Thermococcus barophilus: TERMP_00557
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Entry
TERMP_00557 CDS
T01377
Name
(GenBank) vitamin B12 ABC transporter, B12-binding component
KO
K25034
cobalamin transport system substrate-binding protein
Organism
tba
Thermococcus barophilus
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tba02000
]
TERMP_00557
Transporters [BR:
tba02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalamin transporter
TERMP_00557
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
New_glue
CYP38_PsbQ-like
PHM7_cyt
FtsK_SpoIIIE
Med13_C
Motif
Other DBs
NCBI-ProteinID:
ADT83534
UniProt:
F0LJZ7
LinkDB
All DBs
Position
complement(470475..472334)
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AA seq
619 aa
AA seq
DB search
MKRKVALILTILMFGVIIAGCINQQTSSTPSTTPTSTTTQATSSKEMTVAHTTSTTKAPT
ETEQRKYPITITDFADRKVTIEKEPQRIVSLAPSITETLYFLGALDKVVGVTQYDDFPPG
VQEGRTIIGGFSNPNIEIIASLKPDLIIATSMHMKYLTQLEQIAPVVIIDPKNMDDIYKA
IELLGKVVDKEEQAQKVIANMKSKVEEIQSAVKSKPKVKVFYVVWNNPMMTAGKGTFIDD
LIKLAGGENIFSDVEGWAQVSIEQVLAKDPEVIILTPHCGMTVQDVYHSELSKTTAAKEG
KVVVIQNDNVLVRPSPRIVIGLEELAKVIHPDVFGGKYPLTVIDFMNRTVTIEKEPQRIV
SLAPSITETLFYIGAGDKVVGVTKYDDFPPQVANITKIGGFSDPNIEIIASLKPDLIIGT
SMHLKYLDQLQQIAPVIIVAPRNIDEIYKQIELLGKVTNREEYAQSVVNEMKAKVEYITS
RVREKPKPKVFFISWWNPIYTPGRDTFQGDLIELAGGENVFNDLTGWAQVSIEQVLARNP
EIIILSAHAGISPEQLCETELAKTDAVKNGRVYVISDDNIISRPGPRIVLGLEELAEFIH
PEVFNYEPQPLKCSASVSG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaagtcgccctaattttgacaattttgatgtttggagtaataatagcgggc
tgtataaatcaacagacatcttcaaccccaagcacaaccccaacaagtacgactacccaa
gcaacctcctcaaaagagatgacagtagctcacacaacctcaactacaaaagctccaacg
gagactgaacagcgaaagtatccaataaccatcactgattttgcagatagaaaagttacc
attgaaaaagagcctcagagaattgtttccttagctccaagtataaccgaaaccttatac
ttcctcggggctttggacaaagttgtaggtgttacccaatatgatgattttcccccggga
gtgcaggaaggtagaacaattattggtggattcagcaatccaaacatcgaaataattgca
tctctcaaacccgatctaatcatcgctacatctatgcacatgaaatatctcactcaactt
gagcagattgctccggttgtaataattgatcctaagaacatggatgatatctacaaagca
attgaacttcttggtaaagttgtcgacaaggaagaacaagcacaaaaagttattgcaaat
atgaagtcaaaagttgaggaaatccaaagtgcagttaagagcaagccaaaagtcaaggtc
ttttatgttgtttggaataatcccatgatgaccgctggaaagggaactttcattgatgac
ttgattaaattagccggtggagaaaacatattcagtgatgttgaaggatgggcacaggta
agtatagagcaggttttagctaaggatccagaagtcataattctcacacctcattgtgga
atgacggttcaggatgtatatcacagcgaactttcaaagacaactgccgccaaggaagga
aaggtggtggtaattcaaaacgacaatgtccttgtaagaccctctccaagaattgttatt
gggctcgaagagcttgcaaaagttattcatcctgatgtatttggaggaaagtaccccctc
actgttattgacttcatgaacagaacagtcacaattgaaaaagagccccaaagaattgtc
tcacttgcaccaagcataacagaaaccctgttctatataggtgccggtgataaggttgtt
ggtgttacaaagtacgatgacttcccacctcaagtagctaatattacgaaaattggtggc
tttagcgatcctaatattgagattatcgcatcacttaaaccagacttgattatcggaact
tcaatgcaccttaaatatcttgaccagctccagcagattgcaccggtaataatcgttgca
ccaagaaacattgatgaaatctataaacaaattgagcttttgggtaaggttaccaacaga
gaagaatatgcacagagtgttgttaatgaaatgaaggcaaaagttgagtacataacttca
agggtcagggagaaaccaaaaccaaaggttttcttcataagctggtggaacccaatctac
actcctggtagagatacgttccaaggcgatcttattgaattagctggtggagagaatgta
ttcaatgatttaactgggtgggcacaagttagcattgagcaggtattggcgagaaatcca
gaaatcataatactttcagctcatgctggaatttcgccagaacagctctgtgagacagaa
ctcgcaaagacagatgctgtaaagaacggtagggtctatgttataagcgacgacaacata
atttcgcgtccagggccaagaattgtgctgggattggaggagctggcagaattcatacat
cctgaagttttcaactatgaaccacaaccgttaaagtgtagtgcctcggtctctggttga
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