Thermococcus barophilus: TERMP_00748
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Entry
TERMP_00748 CDS
T01377
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tba
Thermococcus barophilus
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tba03016
]
TERMP_00748
Enzymes [BR:
tba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
TERMP_00748
Transfer RNA biogenesis [BR:
tba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TERMP_00748
Prokaryotic type
TERMP_00748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADT83725
UniProt:
F0LL74
LinkDB
All DBs
Position
complement(655751..657019)
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AA seq
422 aa
AA seq
DB search
MDYKEFFRQFKHLSETPGIGGKIKQRPEDFIVVEIVPKRLISEGHCLIYKLKKKNWETMA
AVKEIAKRIGIHYKEIGFAGTKDRHALTVQYISICDTSLKEKLDSLKIQDIKLEFVGYGK
ALKLGMLIGNKFEIVIREPNLPIEEAFERTKEIIAELKSKGGFPNYFGYQRFGEKRVVNH
EIGKLLLKGQFEDAAIKFLGEYTGEMEGDEARKNFLETKNIEKALEEFPKFLRYERAMLY
RYKETKSWKKAFAVLPRPILRIFIHSYQSYLFNKVLSRRIEEGLPLNEALVGDIVCQIKH
GIPLRSKTFKVTRGTLRLVNEKIKKGEAMVTGPIFGFASRLADGEMGKIEREILEDEGIN
LKEFKMKSLKILAEPGGRRELLIKPLEFKYKALPEENAMVFKFFLPKGVYATSVLREIMK
DH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggactacaaagagtttttcaggcagtttaagcatttaagtgaaactccgggtatcgga
ggaaaaatcaagcaaagacccgaagatttcatagttgttgaaatagtcccaaaaaggcta
attagtgaaggtcattgcttaatttacaagctcaagaagaaaaattgggaaacaatggca
gctgtgaaagagattgcaaaaagaatcgggatccattataaagagattggatttgctggg
acaaaagatagacatgcacttactgttcaatacataagcatttgtgatacgtcactaaag
gaaaagcttgactctctaaaaatccaagatataaagcttgagtttgtgggttatggcaaa
gctttaaagcttggcatgttgatcggaaacaagtttgaaattgtaattagagagccaaat
ttaccaattgaggaagcttttgaaagaacaaaggagataatagctgagcttaaatctaaa
gggggattcccaaattattttggatatcagcgctttggcgagaagagagttgtgaatcac
gaaatcgggaagcttctattgaaagggcagtttgaagatgctgcaattaaatttttaggt
gaatacaccggtgaaatggagggtgatgaagcgagaaaaaattttttagagaccaagaac
atcgaaaaagcattggaggaatttcctaaattcttgagatacgaaagagcgatgctctat
cggtataaagagaccaagagctggaaaaaagcgtttgcagttttgccgagaccgatcctc
agaattttcatacattcatatcagtcatatcttttcaataaagtcctttccagaagaatt
gaggaggggttacccctaaatgaggctttagttggtgatattgtctgtcaaattaagcac
ggaattcctttgaggagcaagactttcaaagtcacaagaggaacgctaaggctggtaaat
gaaaaaatcaaaaagggggaggcaatggttacaggtccaatattcggctttgcttcccgt
ttagcggatggggaaatgggaaaaatagagagggagatacttgaagatgaagggataaac
ctaaaagagttcaaaatgaaaagtttaaaaatcttggctgagcctggtggaagaagagag
cttttaataaagcctttggagtttaaatataaagctcttcccgaagagaatgctatggtc
tttaagttcttccttcctaaaggagtttatgctacaagcgtcttgagggagattatgaag
gatcattga
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