Thermococcus barophilus: TERMP_00916
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Entry
TERMP_00916 CDS
T01377
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tba
Thermococcus barophilus
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tba03400
]
TERMP_00916
DNA repair and recombination proteins [BR:
tba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TERMP_00916
Archaeal homologous recombinant proteins
TERMP_00916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
AAA_21
Baculo_PEP_C
AAA_29
AAA_13
ABC_tran
NPV_P10
Laminin_II
BLOC1_2
Nuf2_DHR10-like
Spectrin
Crescentin
TACC_C
DUF1664
ERM_helical
GAS
HMBD
Seryl_tRNA_N
SbcC_Walker_B
FtsK_SpoIIIE
ZapB
DASH_Dam1
DUF948
DUF5679
Occludin_ELL
NTPase_P4
DNA_ligase_ZBD
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADT83892
UniProt:
F0LM45
LinkDB
All DBs
Position
complement(790948..793599)
Genome browser
AA seq
883 aa
AA seq
DB search
MRIEKIIVRDFRSHEFTKVTFTSGINLIIGQNGSGKSSLLDAILIGLYWPAKPKDLKKDS
FLRVNGKSTEITIFFEKDGVRYQVHRNITRGIAFAKYYDGTWHYVTDANQKAVRDWMEKL
IPYDIFVNAIYIRQGEIDAILESDESREKVVRKVLGLDKYENAYKNLLEVRKVIDSKIKG
IEEYLNAMKNIDDMIKEAEKELSSAIRQINELSPQIPRLRREVEELEKKLDELDKLAREL
EKLKESKSGIEKSLEGINAKINSLAASIAERELKVKELDEKVKELEKIKPKAERYKELEE
FYKEYSEIKAKAEKEVERYEGQISQIKERLEELEGRAEELEELQEKISKLDEQLGELEEY
VKQYDEALRIKKTIESLRKRLSLSGEELKKLKAEIENAKQRKEEILREIEEIGEKKGELK
NATSEKNKAILELRKAKGKCPVCGAELTEKHREDLIKKYTLEIESYAKEMEQLMRREKEL
RAELVKIEKILKKEKEVIANEEIFNQMQEHEKRLSKFNLKELEEKVKKHENLSAEKNKLE
GRLRSIQEELKKKAALEKKKIYLERKISEIKANLYEYEVKLKNLGFEDIDTLKAEIGMLK
PIYEKYLKLLNSQKELKAEKERLQRDKNELEILKEKKAGLEKALSEIKERLGELEKDYSK
DEHERVRKEHIKKREALVKAETELENLEKRKEELIKNLENLKNEKENVKIKRKELEDLKK
ARERVQKLREKVRMFKNILKEDALAKVGEYASEIFEELTEEKYSGITVKAKESKVVLGVI
YDGKERDLSFLSGGERIALGLAFRLALSLYLAGEIPLLIMDEPTPYLDDERRRRLVDIME
RYLRKIPQVIIVSHDEELKDAADRVIRVRLENGVSRVEEVEVS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgaaaaaatcattgtgagggacttccgctctcatgaatttactaaagtaact
tttacgtctggaataaacctgataataggtcaaaatggttctggaaaaagctccctgctt
gatgcgatactcattggcttatactggcctgcaaaacctaaagacctcaaaaaagacagc
ttcctccgtgttaatggaaaaagcacagagataacgatattcttcgaaaaagatggagtg
agatatcaagttcaccgcaacataacgaggggcatcgcctttgctaagtactatgacggc
acttggcactatgtaaccgatgccaatcaaaaagctgtgagagactggatggaaaagctt
attccttatgacatttttgttaatgcaatttacataagacagggagagattgatgcaata
cttgagagtgatgaaagcagagagaaagttgtgaggaaagtgttggggcttgataaatac
gaaaacgcatacaaaaaccttcttgaggtcagaaaagtgatagactccaaaattaaagga
attgaagaatacctgaacgcaatgaagaacatagatgatatgattaaagaggctgagaaa
gaactaagcagtgctattaggcagataaatgagctttctcctcaaattccaagacttaga
agggaagttgaggagcttgagaaaaaattagacgagcttgacaaacttgccagggagctt
gagaagttaaaagaaagcaagtctgggattgagaaatcccttgaaggaataaacgcaaag
ataaactcccttgctgcttccatagctgagagggagttaaaagttaaagaacttgatgaa
aaggtcaaagagcttgagaaaattaagcccaaggcagaaaggtacaaagagcttgaagaa
ttttacaaagagtacagcgagataaaagccaaagcagaaaaagaggttgagagatatgaa
ggtcagatatctcagatcaaggaaagactcgaggagctggaaggaagggcggaggaactt
gaggaattacaagagaagatatcaaaacttgacgaacagcttggagaactggaagaatat
gtcaagcagtatgatgaagccttaagaattaaaaagacgattgaatccctaaggaaaagg
ctcagcttaagcggagaggaactcaaaaagctcaaagctgaaattgaaaacgccaagcag
aggaaagaggaaatccttagggaaattgaagaaattggagagaaaaagggagagctaaaa
aacgccacaagtgagaagaacaaagccattttggagctcagaaaagctaagggcaaatgt
ccagtttgtggagctgaactaacggagaagcacagggaggatttgattaaaaaatatact
ctggaaatcgagagctatgcaaaagaaatggagcagcttatgaggagggaaaaagaactc
agggctgagcttgtaaagattgagaaaatactgaaaaaggagaaggaggttatagctaac
gaggagattttcaatcaaatgcaggaacatgaaaagaggctttctaaatttaacctcaag
gagcttgaggagaaagttaagaagcatgagaacctctctgctgagaagaacaagcttgag
gggagattgaggagcattcaagaggaactgaagaaaaaagctgccttggagaagaagaaa
atctatctggagagaaagatttctgaaatcaaagccaatttgtatgagtatgaagttaaa
cttaagaatctcggatttgaggacatcgacactctaaaagccgagattggaatgttgaaa
ccgatttatgaaaaatatctaaagctcttgaactcgcagaaagaactcaaggctgaaaaa
gaacgtcttcaaagggacaagaacgaattagagatacttaaagagaaaaaagctgggctg
gaaaaagctctttctgagataaaagaaaggttaggagagcttgaaaaggattacagcaaa
gatgaacatgaaagagttagaaaagagcacattaaaaagagggaggcacttgtaaaggca
gaaactgagcttgaaaatcttgaaaaaagaaaagaggagctgattaaaaacttagaaaac
ttaaagaatgagaaggaaaacgttaaaatcaagagaaaggagcttgaagacttaaagaaa
gcccgtgagagagttcaaaagctgagagaaaaagtcagaatgttcaagaatattctcaag
gaagatgctttggcaaaagttggagaatatgcaagtgaaatctttgaggagctgacagag
gagaagtattcagggataactgtgaaggctaaggagagtaaggttgttcttggcgttatt
tacgatggaaaagaaagggatttgtcattcttaagtggtggtgaaaggatagcccttgga
ctggcgtttagactggctctgtctttgtatcttgctggagaaatccccttacttataatg
gacgaaccgacgccctatcttgatgacgagagaaggaggaggcttgttgatataatggag
cgctaccttagaaaaatcccgcaggtgatcatagtttctcacgatgaggagctgaaagac
gctgcagacagggtcattagggttagacttgagaatggggtttcaagagtggaagaggtc
gaggtgagctga
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