Thermococcus barophilus: TERMP_00918
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Entry
TERMP_00918 CDS
T01377
Name
(GenBank) bipolar DNA helicase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tba
Thermococcus barophilus
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tba03400
]
TERMP_00918
DNA repair and recombination proteins [BR:
tba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
TERMP_00918
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
T4SS-DNA_transf
Dna2
RsgI_N
DUF7607
YfeC-like
Prominin
DUF4635
Motif
Other DBs
NCBI-ProteinID:
ADT83894
UniProt:
F0LM47
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All DBs
Position
complement(794925..796658)
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AA seq
577 aa
AA seq
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MRVTEEVVGIVRGEATVTNYTFSAQPDAELRFGEFVVAQNREGEWVIGNIRKLENINWLL
SGGKSTYHALQLDLEQYGDSIEANEELIATVRILGKIKVNGGKVEVLPNRVPIPNGRKVY
RLSDEVLRAIYNPGVGYIEVGNLLLRESVPIYLNADELVSRHFAVLAVTGAGKSNTVAVM
ISQIVEKLRGTVVVLDPHGDYIKLKLPNTGKEYVKIIEAKIRPEEMDSEELADLIEVAKN
ATIQREFLAKAWETVKHDYPNLGGREIIEKLMETINDWIRHKEAKYWDGAKQSYLTEELK
SERVDTLRGVVLRIRRFLRNYGALLTSEDLISQIEPGKANVIDLGPLDEGQMKVVVGKLL
HAIFEARVDYEKARKKLERIKEELRESRVARTSKLDEEMKELEKTMKDIEAKSKALAEPI
LLIVEEAHIFAPQGEHNDAVRILSRIAREGRKFGVGLGIVSQRPNKLNEDVLSQTNTKII
LRIVNPKDQDYVLKASEQLSSDLLSDIASLGKGEAVIVGQAIALPALVKIHNFKSKGGDY
GGEDIGVVSRWLKRAEEEEREREIQQIYEDEGIEYDL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagagtaacagaagaggtcgttggtatagtcagaggagaggcaactgtcacaaactac
acattctctgctcagcctgatgccgaattacgattcggagaatttgttgttgctcaaaat
agggagggtgagtgggtcattggcaacattagaaagcttgaaaatataaactggcttctc
agcggaggaaaaagcacatatcatgctcttcaactggatttagaacaatatggggatagt
attgaagctaatgaagaacttatagctactgtaagaatccttggtaaaatcaaagttaac
ggaggaaaagttgaggttttgccaaatagggtgcccattcctaatggtaggaaggtgtat
cgtctaagcgacgaagttctcagggcaatatacaatcccggagttgggtatatagaggtt
ggaaatcttcttttgagagaaagtgttccaatttatctgaatgctgatgagctcgtttca
aggcattttgcagttttggctgttacgggtgctggtaaatcaaatactgtggctgtgatg
attagccagattgttgaaaagcttagaggtacagttgttgttcttgatcctcatggagat
tatattaagctaaagcttccaaatactggaaaagagtatgtcaagataattgaagctaaa
ataagaccggaggagatggacagtgaggaattggctgatttgatcgaggttgcaaagaat
gcgacaattcagagagagttcttggctaaggcttgggaaacagttaagcatgactaccct
aatcttggcggcagagagattatcgaaaagcttatggaaacgataaacgactggataaga
cacaaggaggcaaaatactgggatggagcaaagcagagttatctcactgaggagctcaag
tcggagagagttgatactttaaggggagttgtcctgagaatcagaagattcctgagaaac
tatggagcgttattgacgagtgaggatttgatttcccaaattgagccgggtaaagcaaat
gtcattgatttaggtcctttggatgaggggcagatgaaagttgtagttggtaagcttttg
catgctatttttgaggcgagagttgattatgaaaaagcaaggaagaagcttgaacgcata
aaggaagagttgagagaaagcagagttgccagaacttcaaagcttgatgaagaaatgaaa
gagcttgaaaaaactatgaaggatattgaggctaagagcaaagcccttgctgaaccaatc
cttctgattgtggaggaggctcacatctttgctccgcaaggagagcacaatgatgctgtg
agaattttaagcaggattgcaagggaaggtagaaaattcggtgtagggttggggatagtc
tcccaaagaccaaataagctgaatgaggatgtcttgagtcaaacaaacacgaagataatt
ttgaggattgtgaatccaaaagaccaagattatgttctcaaagcgagtgaacagctgagc
tctgatttgctctcagatatcgcctctctcggtaaaggtgaggctgtaatagttggccaa
gcaattgctctacccgctttggtcaaaatacacaactttaaatctaaaggcggagattac
ggtggtgaggatataggggtcgtttcaagatggctcaagagggctgaggaagaagaaagg
gagagggaaattcagcagatttatgaggatgaggggatagagtatgacctttaa
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