Thermococcus barophilus: TERMP_00921
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Entry
TERMP_00921 CDS
T01377
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tba
Thermococcus barophilus
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tba03016
]
TERMP_00921
Enzymes [BR:
tba01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TERMP_00921
Transfer RNA biogenesis [BR:
tba03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TERMP_00921
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
ADT83897
UniProt:
F0LM50
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All DBs
Position
797356..797871
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AA seq
171 aa
AA seq
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MKEPIAFYLSGERVFSEREKAINQFYNKRYFGEVVNGKLFLSLIEAAYLMDRGKIKVFDG
NKELSLKELFDLGRKKDEQFDLKFLVYKDLRDRGYVVKTALKYGSHFRVYRKGMEEHSDW
LVWVVSENQKMFPNDLTARVRVAHGVRKKMIMAVVDEDNDIVYYQIERVKF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaaccaatagccttttatctcagcggagaaagggtttttagtgaaagggagaag
gcgataaatcagttttacaacaagcggtattttggagaagttgttaatgggaagctcttc
ttatccttaattgaagctgcatacctgatggacagaggaaagattaaagtgttcgacggg
aacaaagagctaagcctaaaagagctttttgatttgggaaggaagaaagacgagcagttc
gatctgaagtttttagtgtacaaagatttaagagatagagggtatgttgtaaaaactgcc
cttaaatacggctctcactttagagtttaccgcaaaggcatggaggagcattcagactgg
cttgtttgggttgtgagtgaaaaccaaaagatgtttccgaacgatctaacggcgagggtt
agagtcgcacatggagtgaggaagaaaatgatcatggcggttgttgatgaagacaacgac
attgtgtactatcaaattgaaagggtgaagttttaa
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