Thermococcus barophilus: TERMP_01616
Help
Entry
TERMP_01616 CDS
T01377
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tba
Thermococcus barophilus
Pathway
tba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TERMP_01616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tba03400
]
TERMP_01616
Enzymes [BR:
tba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TERMP_01616
DNA repair and recombination proteins [BR:
tba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TERMP_01616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
ADT84591
UniProt:
F0LJ69
LinkDB
All DBs
Position
complement(1406065..1406913)
Genome browser
AA seq
282 aa
AA seq
DB search
MKIRIDRLRFGTAGIPLSTPKPSTITGIQRVRELGLDAMELEFVRGVNISPEMAKKIKYV
AQRHDVLLTAHAPYYINLNAAEKSKVEASKKRIIQSAERLHEAGGWSVVFHAGYYLKQPP
ETVYEKIKNEIKDIVRQLQDKGIEIWIRPELTGKPTQFGELKELIKLSQDVEMVLPAIDF
AHAHARDKGKLNTAEEWREMLSLIEQELGREALDNMHIHVSGIHYTEKGEKHHLNLQESD
LRWEDLLKVLKEFRVKGVVISESPNIEGDAILMKKKYERIKL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaggatagacagattgaggtttggaacagcggggattccgctctcaacccca
aaaccctcaactatcaccggaattcagcgggttagggagcttggattagatgcaatggag
cttgagtttgtaagaggtgtaaacatctccccggaaatggcaaagaaaataaagtacgtt
gctcagaggcatgatgtccttttaacggctcatgctccatactacataaatctcaacgct
gcagagaagagcaaggttgaggcaagcaagaagaggattattcagagtgctgaacgtttg
catgaagccggtggctggagcgttgtgtttcatgccggctattaccttaagcaacctcca
gaaacagtatatgagaagattaaaaatgagattaaagacattgtcagacaactccaagac
aaggggatagaaatctggataaggccagaactcacaggaaaaccaactcagtttggcgag
ctcaaggagctgataaagctgagtcaggatgtggagatggttttgcccgctatagatttt
gcccatgcacatgcgagagacaaaggaaaactgaacacagcagaagagtggcgtgaaatg
ctttcactgattgagcaggaacttggaagagaggctttagataacatgcacattcacgta
agtggaatccactataccgagaagggtgaaaagcatcatttgaaccttcaggagagcgat
ttgagatgggaggacttgcttaaagtgctgaaagagttcagggtgaaaggtgttgtaata
agtgaaagccccaacattgagggagatgcaatcttgatgaagaagaaatacgagaggata
aaactctaa
DBGET
integrated database retrieval system
