Thermococcus barophilus: TERMP_01858
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Entry
TERMP_01858 CDS
T01377
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tba
Thermococcus barophilus
Pathway
tba03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TERMP_01858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tba03000
]
TERMP_01858
03021 Transcription machinery [BR:
tba03021
]
TERMP_01858
Transcription factors [BR:
tba03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
TERMP_01858
Transcription machinery [BR:
tba03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TERMP_01858
RNA polymerase III system
TFIIIB
TERMP_01858
RNA polymerase I system
SL1/TIF-1B
TERMP_01858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Sigma70_r1_1
DUF7223
DUF4443
DUF2200
P_gingi_FimA
Motif
Other DBs
NCBI-ProteinID:
ADT84833
UniProt:
F0LKJ9
LinkDB
All DBs
Position
complement(1645781..1646305)
Genome browser
AA seq
174 aa
AA seq
DB search
MLIAMEYKIVNIVVSGHLGSQINLEKLLELDNFSYDPEYYHGGYLRLSNGLSVTIYRTGK
YIIPGVKRLEDIEPSFDEMIRYLSKLIDVSNAEKPKIRNLVISGKLEEKLSLEELAIKLP
NVEYDPEQFPGLILKFNKSLTVLLFNSGRFVVVGAKSLEEAENAIKKLKKLLKS
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgttgatagcaatggagtacaaaatagtcaacatagtagtttcaggacacttgggaagt
caaataaatctcgaaaaattgttagaattagataatttctcctatgatccagaatattat
catggaggttatttaagactaagtaacggcttgagtgtaacaatttacagaactggaaaa
tacataattcccggtgttaaaaggctggaagacattgagccatcttttgatgagatgata
cgatatctgtcaaagctcattgatgtgtcaaacgctgaaaaaccaaagattcgaaatctt
gtgatcagtggcaaactcgaagaaaagttgagtttagaggaacttgccattaagctgcca
aacgttgaatatgatcccgaacagttccctggtttaattctcaagtttaataaaagcttg
actgttctgcttttcaacagtgggcgttttgtagttgttggtgcaaaaagtcttgaagaa
gctgagaatgcaattaaaaaattaaaaaagcttctcaaaagctaa
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