Thermococcus barophilus: TERMP_01962
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Entry
TERMP_01962 CDS
T01377
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tba
Thermococcus barophilus
Pathway
tba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TERMP_01962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tba03400
]
TERMP_01962
Enzymes [BR:
tba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TERMP_01962
DNA repair and recombination proteins [BR:
tba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TERMP_01962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADT84936
UniProt:
F0LL29
LinkDB
All DBs
Position
complement(1756471..1757055)
Genome browser
AA seq
194 aa
AA seq
DB search
MAKDELMKKLEERIRNCKKCPLSALRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVG
RAGKVLDELLSEIGLKREDVYITNIVKCRPPNNRDPNEDEIKACSPYLDRQIDIIRPKII
VPLGRHSMSYILRKFGFEAEPISRIHGKTFEARTLFGKVIIMPMYHPAVALYRPQLKEEL
RKDFKKLKNVLMNT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagatgaactcatgaaaaagcttgaagaaaggataaggaactgcaaaaagtgt
ccattaagtgcgttaaggacaaatgccgttcctggcagcggaagctatgacgcaaaggtg
atgtttgttggcgaagcccctggctattgggaagatcaaaagggtttgccttttgttgga
agagctggaaaggttttggatgaactcctatctgaaattggtttgaaaagggaagatgta
tatatcaccaatattgtgaaatgccgccctcccaataatagagaccccaacgaagacgag
atcaaagcctgctctccatatctggatagacagattgacataattagacccaaaataatt
gtcccattagggcgacattctatgagctatatccttaggaaattcgggttcgaagcagag
ccgataagcaggatacatggaaaaacatttgaggcaagaacgctttttggaaaggtaatt
ataatgccgatgtaccatccagcggtagctttgtacagaccccagcttaaggaggagctg
agaaaagactttaaaaagctcaagaacgtcttgatgaatacttaa
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