Turicibacter bilis: J0J69_00325
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Entry
J0J69_00325 CDS
T08328
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
tbb
Turicibacter bilis
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbb03019
]
J0J69_00325
03009 Ribosome biogenesis [BR:
tbb03009
]
J0J69_00325
Enzymes [BR:
tbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J0J69_00325
Messenger RNA biogenesis [BR:
tbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J0J69_00325
Ribosome biogenesis [BR:
tbb03009
]
Prokaryotic type
rRNA helicases
J0J69_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UUF06074
LinkDB
All DBs
Position
66402..67703
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AA seq
433 aa
AA seq
DB search
MSVRFQDLNIKPYLKAAVADLHFETLTQIQEEVMPLALKGKDIIGQSQTGSGKTHAFLIP
IFQGLDEELQQVQAVITTPTRELAEQIYNVANQLASFSDKPIKIARYVGGTDKQKTIEKL
GTQPQIVIGTPGRIKDLAINERVLLVHTAKMFVVDEADMTLETGFLTDIDQIAGTMGRGL
QMMVFSATIPQALKPFLKKYMTAPTHVHIQPRQQTAVKIEHILYPTKHRSRVNIIANILK
ALNPYLAIIFVNTKQNATTVSNALMSQGFRVGQIHGDLTPRQRRQMMQRIRNLEFQYIVA
TDIAARGIDIEGVSHVINYELPQDLEFYIHRVGRTARGNYDGVAITLYDSAEEELLQELE
ARGIEFNYKEVKNGELVAVNARNARQKREKKENEIDKIAKSKVRKPKKVTPGYKKKMKAQ
MEQVKRQERRKRK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgttttcaagatttaaatataaaaccatatttaaaggcagctgttgctgat
ttacattttgaaactttaacacaaatccaagaagaggttatgccgttagcattaaaagga
aaagatattatcggtcaatcgcaaacgggaagtggaaaaacacatgcgttcttaattcca
attttccaagggttagatgaagagttacaacaagttcaagcagtgattacaacaccaaca
cgtgaacttgctgaacaaatttataatgtggcaaatcaactagcatcattcagtgataaa
ccaattaaaattgcacgttatgtgggtggaaccgataaacaaaaaacaattgaaaaatta
ggtacacagccacaaatcgttatcggaacacctggacgtatcaaagacttagcgattaac
gaacgtgtcttattagttcatacagcgaaaatgtttgttgtcgatgaagcagatatgaca
ctggaaacagggtttttaacagatattgatcaaatcgcaggaacaatgggacgcggatta
caaatgatggttttctcagcaacaattcctcaagcgttaaaaccattcttaaaaaaatat
atgacagccccaacgcatgttcatattcaaccacgccaacaaacagctgttaagattgaa
catatcttatatccaacgaaacaccgtagtcgtgttaatatcattgctaatattttaaag
gcattaaatccatatttagcaattattttcgtcaatacaaaacaaaatgccacaacagtt
tcaaatgctttaatgtcacaaggattccgtgttggacaaattcatggtgatttaacacca
cgtcaacgtcgtcaaatgatgcaacgtattcgtaacttagaattccaatacattgtggct
acagatattgcggcacgcggaattgatattgaaggagtaagtcatgtcatcaactatgaa
ttaccacaagatttagagttctacattcaccgtgttggacgtactgctcgtggaaactat
gatggagtggcaatcacattatatgattcagctgaagaagaattattacaagagttagaa
gcacgtggaattgaatttaactataaagaagttaaaaatggtgaattagtggctgttaat
gctcgtaatgcccgtcaaaaacgtgagaaaaaagaaaatgaaatcgataagattgcaaag
tcgaaagtgcgtaaacctaagaaagtaacgccaggatataaaaagaaaatgaaagctcaa
atggagcaagtgaaacgtcaagaacgccgtaagcgtaaataa
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