Turicibacter bilis: J0J69_02645
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Entry
J0J69_02645 CDS
T08328
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tbb
Turicibacter bilis
Pathway
tbb03030
DNA replication
tbb03430
Mismatch repair
tbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0J69_02645 (holA)
03430 Mismatch repair
J0J69_02645 (holA)
03440 Homologous recombination
J0J69_02645 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbb03032
]
J0J69_02645 (holA)
03400 DNA repair and recombination proteins [BR:
tbb03400
]
J0J69_02645 (holA)
Enzymes [BR:
tbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0J69_02645 (holA)
DNA replication proteins [BR:
tbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J0J69_02645 (holA)
DNA repair and recombination proteins [BR:
tbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J0J69_02645 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DUF6115
DUF8279
Motif
Other DBs
NCBI-ProteinID:
UUF06503
UniProt:
A0A9Q9FDX7
LinkDB
All DBs
Position
complement(561540..562505)
Genome browser
AA seq
321 aa
AA seq
DB search
MAIYTILGEQTVLCEKKINDLLTKHQIESFDVVSYDMKEATIQEALFDLQTVAFLSNKKA
VIVRNPSFLTGKEGKGDPAHDLNAFINFLEHPVTENILIIYAPYEKLDERKKVVKILRKQ
SEVFTFETYSEQSLKQWAEKKLKAEGIECHPKAIELLIKLTHAKIDVLYHEIEKIYLYFI
DQPSKILSVEVVELLVARQLEDNVFLLTDALVQRKIKEAYLIYEDLMTQNEEPFKLLILI
ANQFRLMSQVIGLSKQGYRETDIAKTLNVHPYRVKLIHGQSHRFEQETIAKYLYQLADID
YKIKSGVLQKELALEMFILNL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttatacaatcctcggcgaacaaacagttttgtgcgagaaaaaaattaatgat
ttattaacgaaacatcaaattgaatcattcgatgtggtgtcctatgacatgaaagaagcg
accattcaagaagcactttttgatttacaaacagtcgccttcttaagtaataaaaaagcg
gtgatcgttcgtaacccatcctttttaactggtaaggaggggaagggtgatcccgcacat
gatttaaatgcttttataaactttttagaacatcctgtgacagaaaatatcctcattatt
tatgctccttatgaaaaactcgatgaacgtaaaaaagtagtaaagattttaaggaagcaa
tcagaagtgtttacatttgaaacttattcagagcaatcgctcaaacagtgggcagagaag
aagttaaaagctgaaggaattgaatgtcatccaaaagccatagaattattgattaaattg
acccatgctaaaattgatgtgctgtaccatgaaattgagaagatttatctttatttcatt
gatcaaccatcaaaaattttatcagtagaagtcgttgagttgttagtggcccgtcaatta
gaagataacgtgtttttactaacagatgcactggttcaacgtaagattaaagaggcttat
ctcatctatgaagatttaatgacacaaaatgaagagccatttaagttactcattttaatt
gcgaatcaatttcgattaatgtctcaagtgattgggctaagtaaacaaggctatcgtgag
actgatattgcaaaaacacttaatgtgcatccgtatcgtgtgaagttaattcatggacaa
tcccatcgttttgaacaagagacgattgcaaagtatttatatcaattagcggatattgat
tataagattaaatctggtgtactacaaaaagagttagcactagagatgtttatcctaaat
ttataa
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