Turicibacter bilis: J0J69_03475
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Entry
J0J69_03475 CDS
T08328
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tbb
Turicibacter bilis
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbb03032
]
J0J69_03475 (topA)
03400 DNA repair and recombination proteins [BR:
tbb03400
]
J0J69_03475 (topA)
Enzymes [BR:
tbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J0J69_03475 (topA)
DNA replication proteins [BR:
tbb03032
]
Prokaryotic type
DNA Topoisomerases
J0J69_03475 (topA)
DNA repair and recombination proteins [BR:
tbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J0J69_03475 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Zn_ribbon_RPB9
COA8
Motif
Other DBs
NCBI-ProteinID:
UUF06655
LinkDB
All DBs
Position
complement(745708..747771)
Genome browser
AA seq
687 aa
AA seq
DB search
MGKNLVIVESPAKAKTIENYLGSDYVVLSSVGHIRDLATTGPGGLGVDVEDHFKPNYKNV
TGKSKVIKELKQAAKNSDAVYLATDPDREGEAISWHLADVLGLDVDLERRVVFNEITKDA
ILEAFKHPRAIDMDLVRSQESRRILDRIIGFKLSKLLQSKIKSKSAGRVQSVALKLIVER
EKEIQKFVSEEYWSVHAMFERESAKIEAELVKKANKKISIANEDEVKAILAELSDPYVVE
KVEKKNKSKQPKLPFITSTLQQEAASKLGYNAKKTMTIAQKLYEGVNIGSETVGLITYMR
TDSTRLADNFVDATKSFIKQNYGANYVKTGSTNAKKVKNAQEAHEAIRPSSVARTPEEMK
PYLKRDELRLYKLIWERAVASLMKSATVEATTIEVRSNDYLFRVNGQVLVFDGYLRVYSY
EETKNASLPRLSEGDTLALVDVEPQQHFTQPPARYSEAKLIKEMEELGIGRPSTYAQTME
TLKNRGYVTLEDKKFKPTDQGILTSEKLAEFFSEFINVEYTAEMENNLDEISKGQKVWYD
ELKVFYDHFMPMLEDAQKNMEKIAPVEIGEECPECGSPLVIRRGRYGEFVACSGYPTCKY
IKKETKEEAAPVSTGVKCPKCEKGEIVEKKTRRGKVFYGCNQYPSCDYALWHKPVDKKCP
KCDSLLVVKGKKNEIQCPNKECDYKEE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaatttagtaattgtagagtcgcctgctaaagctaaaacgattgaaaactac
ttaggatcagattatgtggttctatcaagcgttggtcatattcgagatttagcaacgaca
ggtccaggaggtttaggtgtggatgttgaagaccactttaaacccaactataaaaacgta
acaggaaaatcaaaggtcattaaagaattaaaacaagcagctaaaaattcagatgctgtt
tacctcgcaactgaccccgaccgcgagggagaggcgattagttggcatttagcagatgtt
ttaggacttgatgttgatttagagcgtcgagtagtatttaatgagattacaaaagatgcg
attttagaagcattcaaacatccacgtgcgattgatatggatttggttcgctctcaagaa
agtcgtcgtattttagaccgcattattggatttaaattaagtaagttattacaaagtaaa
atcaaaagtaaaagtgcgggacgagttcaatcagtagcattgaagttaattgttgaacgt
gagaaagaaattcaaaaattcgttagtgaagaatactggtcagttcatgctatgtttgag
cgggaaagtgcaaaaattgaagcagaattagtaaagaaagctaataagaagatttcaatt
gcgaatgaagatgaagtcaaagccatcttagctgaattaagtgatccttatgtagtcgaa
aaggttgaaaagaaaaataaatcaaaacaaccgaagttaccatttatcacttcaactctt
caacaagaagccgcaagtaaattaggttataatgcgaagaagacaatgacgattgctcaa
aaattatacgaaggggttaatatcggttccgaaaccgtcggattaattacgtatatgcgt
accgactcgactcgtttagctgataacttcgtcgatgcaactaagtcatttattaaacaa
aattatggtgcgaactatgttaaaacaggaagtacaaatgcgaagaaagttaaaaatgca
caagaagcgcatgaggctattcgcccatcatcagtcgcgcgtacaccagaagagatgaaa
ccttatttaaaacgtgatgaactgcgtttatataaactcatttgggaacgtgctgttgcg
agcttaatgaaaagtgcaacagttgaagcgacaacgattgaagttcgctcaaatgattac
ttattccgcgttaacggtcaagtgctagtgtttgatggatatttacgtgtctatagctat
gaagaaacaaaaaatgcatctttaccacgtttaagtgaaggggatacgttagcgttagtt
gatgttgaaccacaacaacattttactcaaccacctgctcgttatagcgaagcgaaatta
attaaggaaatggaagagttagggattggacgtccatcgacttatgcacaaacaatggag
acgttaaaaaatcgaggttacgtgacacttgaggataaaaagtttaagccaacggatcaa
ggaattttaacaagtgagaaattagctgaattcttctctgagtttattaatgtggagtat
actgcagagatggaaaataatttagatgaaatttcaaagggacaaaaagtttggtacgat
gaattaaaagtcttttacgatcattttatgccaatgcttgaagatgctcaaaaaaatatg
gagaaaattgctccagttgaaattggggaggaatgtccagaatgtggtagtccacttgtc
attcgtcgtgggcgttacggtgagtttgtcgcatgtagtggctatccgacatgtaagtat
attaaaaaggaaacaaaagaagaggctgcacccgtttcgacaggagttaaatgtccgaaa
tgtgaaaaaggtgaaatcgttgaaaagaaaacacgccgtggaaaagtcttctatggatgt
aatcaatatccaagctgtgattatgcactttggcataaaccagttgataagaaatgtcca
aaatgcgatagcttgttagtcgttaaagggaagaaaaatgaaattcaatgtccgaataag
gaatgtgactataaagaagaataa
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