Turicibacter bilis: J0J69_04340
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Entry
J0J69_04340 CDS
T08328
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tbb
Turicibacter bilis
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbb03400
]
J0J69_04340 (addA)
Enzymes [BR:
tbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0J69_04340 (addA)
DNA repair and recombination proteins [BR:
tbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J0J69_04340 (addA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UUF06817
UniProt:
A0A9Q9CJA9
LinkDB
All DBs
Position
complement(938845..942447)
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AA seq
1200 aa
AA seq
DB search
MSNIPKKPDDTIWNDEQWQAIYEKGHDLLISAGAGSGKTAVLVERIIQKILIDHINIDEL
LVLTFTEAAAAEMKQRIRARIEQELAKQPGNLVLSAQLNKISAANISTFHAFCNKLIRRY
YYLLQLDPVFKIADDIEVGILQDDVIEELFDELAEIEDENYLCLSESFNSDRDDEALKTM
LLKVYELARSNPQMHQWLMNLRSLYEWDGHDLQSWRYYQEIGKLIAPSIDEALLDLEKAR
EFAKDAEVMGIDHKYRTEVYDQDVAYATRLKESQQSAYADLREAFKNTKLATFPRFNAKQ
YDKEAHEQSKNARDAFKKRLGKLEEKYFVYSNETHARHFNESEHLVIALSTLVMKFHERF
LKAKRERQMLDFSDLEWNTLHLLVQEDQPTDVARDIYHQFKEIMIDEYQDTNSMQECIIT
SIAKVAQPEIPIFMVGDVKQSIYRFRLAEPSIFQGKYQAYSSNKEAGNKIDLMKNYRSHQ
QVIDATNFIFKQLMDEPVGEIEYDEAAMLKLGVTGENNDEFNKSEVHLIDKKQFDEESEA
DLNAIEIEAHHIARLILQWVNNGQEIYDRKKGCYRPITYQDIVILMRSLGSVTIFQDVFR
LYNIPLFTEQNTDLFDSIEIINLVSCLKVIDNPYQDIPLVGLMRSPLFFFTERELSLIKV
ATKANSFYDLVLYYRQAGEDELLKQKVAQFVQTIERWRFESKTTSLSQLIIRIYEQTLYY
EFVLGLPHGYLRKANLDVFVDKARMYENSTKKGLYGFVNYIDRMQALGKHFGKAKTVTAN
ENVVRIMSIHKSKGLEFPVVFVSQIHKTFNRQDELGNYLVHKKYGVAVKYIDPVLRLKQK
TIAQSVVGSMIHKEMLAEEMRLLYVAMTRAKSKLIFTGVFDTEKKLASMNEVIKDSSWLL
PSSHRLSAKNYADWVIPAVLKHKDSKEIVETCCEAKPFFLDDQSSWCLRIITEHEQLEEQ
EIENQQVEMQPPALDFEKIFDHSYDYQPLVEINAKQSVSQRKEEETTPMFKGIPEVKPQV
AYDRPSFMKEQQVSGPEAGTALHQFMQHLPISLDHTLESLQDMKTRVIEKEMMTEAMANK
IDLQQVLAFTKNPLYEQLTKAISVKKEVPFMTLVKVADHEQSQILLQGVIDLLAEFEDYV
WIIDYKTDYVRDFNTQYEELKDRYAVQMKYYSKAIKEIYPTKKVSCYVYFLKVQQYIVYE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattcctaaaaagccggatgatacaatatggaatgatgaacaatggcaagct
atctatgagaaaggacatgatttattaatctctgctggagcaggatcaggaaaaacagcc
gtcttagttgaacgaataattcaaaaaattttaattgatcatattaacatcgatgaatta
ctcgtcttaaccttcacagaagcagcagcagctgaaatgaagcagcgtatccgtgctcgt
attgagcaagaacttgctaaacaaccagggaatttagttctttcggctcaattaaataaa
atttcagcagccaatatttcgacctttcatgccttttgtaataaattaattcgtcgttac
tattacttacttcaactcgatccagtgttcaaaattgcagatgacattgaagtgggtatt
ttacaagatgatgtcatcgaagaattatttgatgaactggcggaaattgaggatgagaat
tacctttgtttaagtgagagctttaatagtgatcgcgatgacgaggcgttaaaaacgatg
ttactgaaagtttatgagttggctcgttctaatccacagatgcatcagtggctcatgaat
ttacgctctttatatgagtgggatggacatgatttacagtcatggcgctattatcaggaa
attggaaaactaattgcgccttcgattgatgaagcccttttagatttagaaaaggcacgt
gaatttgcgaaagatgctgaagtcatgggaattgatcataaatatcggacagaagtttat
gaccaagacgtcgcttatgcaactcgtttaaaagaaagccaacaatcagcttatgctgat
ttgcgtgaagcctttaaaaatacgaaattagctaccttccctcgttttaatgcaaaacaa
tatgataaagaagctcatgaacagagtaaaaatgcacgagatgcttttaaaaaacgttta
ggaaaacttgaagagaagtatttcgtgtactctaatgaaacacatgcccgccattttaat
gaaagtgaacacttagtcatcgcattatcaacgcttgtgatgaagtttcatgaacgattt
ctgaaggcgaagcgtgaacgtcagatgcttgacttctccgatttagaatggaacacgctt
cacttattagttcaagaggatcaaccaaccgatgttgcaagggatatttatcatcaattc
aaagaaattatgattgatgagtatcaagatacgaactcgatgcaagaatgtatcattacc
tcaattgcaaaggttgcccagcctgaaattccgatcttcatggtaggagatgtgaagcaa
tcaatttatcgcttccgtttagcagagccgagcatttttcaaggtaagtatcaagcctat
tcaagtaataaagaggccggaaataaaatcgacctaatgaaaaactatcgttcacatcaa
caagtcattgatgcgacgaactttatctttaagcaactcatggatgaaccagttggagaa
attgagtatgatgaagcggccatgttaaagcttggagtaaccggtgaaaataatgatgaa
tttaacaaaagtgaagtgcatttaattgataaaaaacagtttgatgaagagagtgaagca
gacttaaatgcgatcgaaattgaagcccatcatattgcccgtctgattttacagtgggta
aataatggacaagaaatttatgatcgtaaaaaaggatgttatcgtcctattacgtatcaa
gatattgtgattttaatgcgttcacttggtagtgtgacgattttccaagatgtcttcaga
ctttataacatcccactctttacggaacaaaataccgatttatttgactcgattgagatt
attaacttagtctcttgtttaaaagtcattgataatccatatcaagatattccactcgtt
ggtttgatgcgttccccattattcttcttcactgagcgtgaattgtcattgattaaagtg
gcaacaaaagctaattcattttatgatttagttctttactaccgacaggccggagaagat
gaactgttaaaacaaaaagtggctcaatttgtacagacgattgaacgttggcgttttgaa
tcaaaaacgacatcgttatctcaattgattattcgtatttatgagcagaccttatactat
gaattcgttttaggactcccacatggctatttacgaaaagcgaatcttgatgtctttgtt
gataaagcgcgaatgtatgaaaatagtacgaaaaaaggattgtatgggtttgtgaattat
attgatcgtatgcaagcacttgggaagcatttcggaaaagcaaagacggtgacagcgaat
gaaaatgtcgttcgaattatgtcgattcataaatcaaaaggattagaattcccagttgtc
tttgtgtcacaaattcataaaacatttaaccgtcaagatgaattaggaaattatctcgtg
cataaaaagtatggggttgctgtaaaatacattgatcctgtgcttcgactaaagcaaaag
acgattgctcaaagtgtggtagggtcgatgatccataaagagatgttagctgaagagatg
cgtctgttatacgtagccatgacgcgtgcaaaatcaaaactgatttttacgggggtcttt
gatactgaaaagaaattggcttcaatgaatgaagtgattaaagattcatcttggttacta
ccatcaagtcatcgtttaagtgcaaaaaattatgcagattgggtgattccggccgtctta
aagcataaagactcaaaggaaatcgtcgaaacgtgttgtgaagcgaagccgttcttctta
gatgatcaaagttcatggtgtttacgtatcattaccgagcatgagcaactagaagaacaa
gaaattgaaaaccaacaggttgaaatgcaaccaccggctcttgactttgagaagattttt
gatcattcatatgattatcaaccgcttgttgaaattaatgcgaaacaatccgtctctcaa
cgaaaagaagaagaaaccaccccgatgtttaaagggattcctgaagttaagccacaagtc
gcctatgatcgtccatcatttatgaaagaacaacaagtgagtggaccagaagcgggaact
gcactacatcaattcatgcaacacttgccgataagtctcgatcatacgcttgagagtttg
caagatatgaaaactcgtgtgatagaaaaagaaatgatgactgaggcaatggctaataaa
attgatttacaacaagtattagctttcacaaagaaccctctttatgaacaattgacgaaa
gcaataagtgtgaaaaaagaggttccattcatgacgcttgttaaagttgccgatcatgaa
caatctcaaattttattacaaggggttatcgatttattagcagaatttgaggattacgtt
tggattattgattataaaaccgattatgttcgtgattttaatactcaatatgaagagcta
aaagatcgctacgcggtgcagatgaagtattactcaaaagccattaaagaaatttatcct
actaaaaaagtaagctgttatgtatactttttaaaagttcaacaatatattgtttatgaa
tag
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integrated database retrieval system
