Turicibacter bilis: J0J69_04675
Help
Entry
J0J69_04675 CDS
T08328
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tbb
Turicibacter bilis
Pathway
tbb03410
Base excision repair
tbb03430
Mismatch repair
tbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0J69_04675 (recJ)
03430 Mismatch repair
J0J69_04675 (recJ)
03440 Homologous recombination
J0J69_04675 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbb03400
]
J0J69_04675 (recJ)
DNA repair and recombination proteins [BR:
tbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J0J69_04675 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J0J69_04675 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J0J69_04675 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHHA1
DHH
ThiG
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
UUF07232
LinkDB
All DBs
Position
complement(1006955..1009165)
Genome browser
AA seq
736 aa
AA seq
DB search
MNWKISDIFSEDYDSQTTVLNPAIEQLVLARQLATAESLDTFAKEETIHHDPFLFSEMSK
IITRINEAIDQGEPILIYGDYDADGVTGTSILVRCLRELGALVDYYIPNRFYEGYGPNED
AFMQAIADGYQLVITVDNGIAGVDEAEILLEHGVDLIITDHHQVKETLPRAYAILHPELD
ENYPFHHLSGAGVALKVAEALLQEVIPEDFYAIAMLGTIGDVVPLIDENRSIVKRGLAAL
RKTEIEGLNAMMDLAGTEKSEATEVNVGFELCPRLNAPGRMDEAALSVECLIAEGEGEAK
LIADQIESFNSERQKVTQKVLEEATKLVDAKTLAKKKVVILYSPHWHEGILGIVAGRLAK
QWQKAVFVVTDDHEGYIKGSARAVEGYHLFELLNECQDLIERFGGHALAAGITFAPENLQ
ALEDKMNELLQEVEVTPSLQVDLSLPLSDLNVSFVEQLSILAPFGEGNRPPVIELKNVYV
KNVKPIGNKLQHLKFTLYQDKHSVDAIAFNQAPLAMYLTPDTLFSFVGEVKINEWNGNRS
VQFHFIDVLCNEFQFIDLRNRQAYEQRKDQLQLATMYTNATEADELETLVINQLPNSKEE
LMTLITRKKPGNIVIAPLESNVTFAPREKFVIVYKVVKQHGPITLNHQMINYFMRLGISK
NELLFILQVFFEVELVIIKNGSVFPTDSVTKRDLAEAPTYQSQKAKLEMLEFFELTTWSE
LKTTFKTAREEMTHES
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaaaatatctgacatatttagtgaggactatgactcacaaaccacagtgcta
aatcctgcgattgagcaactagtgttagcacgtcaactggctacggctgagagtttggat
acatttgcaaaagaggaaaccattcatcatgatccttttttgttttcagaaatgtcaaaa
attattacgcgtattaatgaggcaattgatcaaggagagccgattttaatttatggggat
tatgatgcagatggtgtaacaggaacatcgattttagttcgttgtttacgtgagcttggg
gccctagttgattattatattccaaatcgcttttatgaagggtatggaccgaatgaagat
gcgtttatgcaggcaattgctgatggttatcagttagtcatcaccgtagataatgggatt
gctggagttgatgaggcagaaattttacttgaacatggggtggatttgattattacggat
catcaccaggtaaaagaaacacttccacgtgcctacgccatcttacatccagaacttgat
gaaaattatccattccatcatttatcaggggcaggagtcgcgttaaaagtcgcagaagct
ttattacaagaagtgattcctgaagatttttatgccattgcaatgcttggaacgataggg
gatgtcgttccattaattgatgaaaatcgttcgattgttaaacgcgggctagctgcttta
cgtaaaacagaaattgaaggattaaatgcaatgatggacctagctggaaccgaaaagtct
gaggcaacagaagttaatgtcggttttgaactatgtccccgtttaaatgctcctggtcga
atggatgaggccgctttatcagtcgaatgtttaattgcggaaggtgaaggagaggctaaa
ctcattgcggatcaaattgaaagttttaatagcgaacggcaaaaggtaacacaaaaagtg
ttggaggaagcaacaaagttagtggatgcgaaaacgttagctaagaaaaaagtcgttatt
ttatattcaccgcattggcatgaaggtattttaggaattgtggcaggacgtttagcgaag
caatggcaaaaagctgtttttgtcgtcacagatgatcatgagggatacattaaaggatcg
gctcgtgcggtagaaggatatcacttatttgaactattgaatgaatgtcaagatttaatc
gaacgtttcggtggtcatgctttagcagcggggattacgtttgctcctgaaaatttacaa
gccttagaagacaagatgaatgaattattacaagaggttgaagtgacgccgagtcttcaa
gttgatctaagtttaccattatcggatttaaatgtttcgtttgttgaacagctttcaata
ctagctccatttggtgaaggaaatcgtccacctgttattgagcttaagaatgtttatgtg
aaaaatgttaaaccaattggaaataagttacaacatttaaaatttacgctatatcaagac
aaacactcagttgatgcaatagctttcaatcaggccccacttgctatgtatttgacccct
gatacgttatttagttttgtgggagaggttaaaataaatgaatggaatggaaatcgtagt
gtgcaatttcattttattgatgttttgtgcaatgagtttcaattcattgatcttcgtaat
cgacaagcgtatgaacaacgaaaagatcaacttcaactagcaacgatgtatacaaatgca
actgaggctgatgagcttgagacattggtcattaatcagcttccaaattcaaaagaagag
ttaatgactttgattacaagaaagaagccaggaaatattgtaatagcgccacttgaatca
aatgtcacgtttgctccacgtgagaagtttgtcatcgtatataaagttgtgaaacaacat
gggcctattacgttgaatcaccaaatgattaattattttatgcgtttagggattagtaaa
aatgaattattatttattttacaggtgttttttgaagtagaacttgttataataaagaat
ggctctgtttttccaactgatagtgtgaccaagcgtgatttagcagaagcaccaacgtat
caatctcaaaaggcaaaacttgagatgcttgagttttttgagttaacgacgtggtcagaa
ttaaaaacaacctttaaaacagctagggaggaaatgactcatgaatcttaa
DBGET
integrated database retrieval system
