Turicibacter bilis: J0J69_05430
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Entry
J0J69_05430 CDS
T08328
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tbb
Turicibacter bilis
Pathway
tbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0J69_05430 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbb03400
]
J0J69_05430 (mutM)
Enzymes [BR:
tbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J0J69_05430 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J0J69_05430 (mutM)
DNA repair and recombination proteins [BR:
tbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J0J69_05430 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
Laminin_G_3
Ribonuc_red_lgC
Auto_anti-p27
DUF603
DZR
DUF2835
Paired_CXXCH_1
Motif
Other DBs
NCBI-ProteinID:
UUF06954
LinkDB
All DBs
Position
complement(1110180..1111025)
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEVETVKEALNQTVKGQTIKDIELRYEPMVKNMSADEFKEKLINQTIQEVSRRGKY
LVFHFDDYQLLSHLRMEGKYFYVDSDFELNPHVHAIFTLENGKRLLYQDTRKFGTYHLYD
KAIDLETTAPFQVLGLEPFATEFTPSYVKEKIQNKKKPIKSLLLDQTVVCGLGNIYVDEV
LYRARLHPLTSSSELTDKDIANVVKYTVEVLARAIELGGTTIRTFRSSHGVSGTFQNELL
VHQRKGENCYECHTPIEKIKVGGRGTYFCPTCQKLTAKEMK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaaccgttaaagaggcattgaatcaaacggtaaaaggt
caaaccattaaagacattgaacttcgttatgagcccatggtaaaaaatatgagtgcagat
gaatttaaggaaaaattaattaatcaaaccattcaagaagtgagtcgacgagggaagtat
ttagtctttcattttgatgattatcaattgttatctcatctacgaatggaaggaaagtat
ttttatgtggattctgattttgaattaaatcctcatgttcatgcgattttcacgttagaa
aatggaaaacgattattatatcaagatacacgtaaattcggaacgtatcatttatacgat
aaagccattgatttagaaacgacggcgccgtttcaagtgttaggtttagagccttttgca
acagagtttacaccatcatatgtgaaagaaaaaattcagaacaaaaagaaaccgattaaa
tcattgttacttgatcaaacagttgtatgtggacttggaaatatttatgtcgatgaagtt
ctttatcgtgcccgattgcatccattaacttcaagctcagaattaacagacaaagacatt
gcaaatgtggtaaaatatacggtagaagtattagcgcgtgcgattgaattaggtggaacg
acgattcgtacgtttcgttcctcgcatggagtttctggaacttttcaaaatgagctgtta
gttcatcaacgaaaaggagagaactgttacgagtgtcacacaccgattgagaaaattaaa
gtcggtggacgtgggacctatttctgtccaacgtgtcagaagttaacggcgaaggagatg
aagtaa
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