Turicibacter bilis: J0J69_05445
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Entry
J0J69_05445 CDS
T08328
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tbb
Turicibacter bilis
Pathway
tbb03030
DNA replication
tbb03410
Base excision repair
tbb03420
Nucleotide excision repair
tbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0J69_05445 (polA)
03410 Base excision repair
J0J69_05445 (polA)
03420 Nucleotide excision repair
J0J69_05445 (polA)
03440 Homologous recombination
J0J69_05445 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbb03032
]
J0J69_05445 (polA)
03400 DNA repair and recombination proteins [BR:
tbb03400
]
J0J69_05445 (polA)
Enzymes [BR:
tbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0J69_05445 (polA)
DNA replication proteins [BR:
tbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J0J69_05445 (polA)
DNA repair and recombination proteins [BR:
tbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J0J69_05445 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0J69_05445 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
DUF4559
HHH
Motif
Other DBs
NCBI-ProteinID:
UUF06957
LinkDB
All DBs
Position
complement(1113484..1116120)
Genome browser
AA seq
878 aa
AA seq
DB search
MNTLVLIDGNSLMYRAYYATAYSGNLMKTSTGIFTNALYGFVNMMNKVMDEYNHTHMLVA
FDAGKTTFRHEFLDSYKDGRKPMPDELRSQINLIKKYLDLLGVKRLELPTYEADDIIGTL
ATLGEQTDFEKIHIITGDKDLLQMADEKTTVHITRKGVTDIESFTPEAVFAKYELSPSQI
VDLKGLMGDPSDNLPGIPGVGEKTAIKLLKQFGTVENLVTHTDELKGKMKEKVEANVEQA
LLCKRMATIHREVPLPVTFDDLFYQGPETAELMNFFKEMEFNAFLKKMKLEEVKEEKPKA
PIRIILEAGELETLSYQNSAIHVEIFEENYHQANILGIAIVNETDAYYVPFEVAKESQAF
MSFLADEGVKKSVFDVKRSRVALMWQGFDLRGVDFDLLLATYVINPTNVSNEFKKVALHY
DYDDVLYDEEVYGKGAKRAVAPIEKVAQHSIDIATAVFKLKETAIEQLKEQEQLSLFEEM
EMPLAEVLAVMEYNGMSLDLTTLDEMGQDLKGRIEALESQIFDHVGAPFNINSPKQLGEV
LFEKLGLPVVKKTKTGYSTNADVLEKLSDAHPIIKLIMEYRTLTKLYSTYIEGLKKACYE
DGKVHTIFNQALTQTGRLSSIEPNLQNIPIRLEEGRMIRRAFVPSQEGWVILGADYSQIE
LRILAHISNTESLIDAFKHGEDIHKKTAMDVFKVSEEEMTSDLRRSAKAINFGIIYGMSA
FGLSENLNITQKEAKKYIDHYLETYSGIHQYMEDTVKYAKFNGYVSTLFNRRRYIPELTQ
KNYAIRQFGERTAMNAPIQGTAADIIKKAMIDVHQAMLEKNVKSRLLLQVHDELIFEVPQ
EELDMMIELVTKTMENVVELQVPLKADYSYGPTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagttttaatagacggaaatagtttaatgtaccgtgcatattatgcaaca
gcatatagcgggaatttaatgaagacaagcacgggtatttttacaaatgcgttatatggt
tttgtcaatatgatgaataaagtcatggatgagtataatcacacgcacatgctagtggcc
tttgatgcagggaaaaccacatttagacatgagtttttagatagttataaagatggacgt
aaaccgatgccagatgaactacgttcacaaattaatttaattaaaaaatatttagactta
ttaggagtgaaacgtttagaattaccgacttatgaagccgatgatattatcggaacatta
gcgacacttggtgagcaaacggattttgaaaaaattcatatcattacgggagataaagac
ttacttcaaatggccgatgaaaagacgacggttcatattacacgaaaaggggtaactgat
attgagtcatttacgccagaagcagtctttgctaaatatgaattatcaccaagtcagatt
gttgatctaaaagggttaatgggggatccatcagataacttaccaggaatcccaggggtt
ggagaaaaaacagcgattaaattattaaaacaattcggaacagttgaaaatctagtaact
catacagatgagttaaaagggaaaatgaaagaaaaagtggaagctaatgttgaacaggcc
ttgctttgtaaacgtatggcaacgattcatagagaagttccacttccagttacatttgac
gatttattctatcaaggaccagagacagcagaactcatgaacttctttaaggagatggag
tttaatgcctttctaaaaaaaatgaagcttgaagaagtaaaagaagaaaagccgaaagca
ccgattcgtatcattttagaagcgggagagttagaaacgttaagttatcaaaatagtgca
attcatgtagagatttttgaggaaaactaccatcaggctaatattttaggaattgcgatt
gtaaatgagacagacgcttattatgtgccttttgaagtggcaaaggaaagccaagcattc
atgtcatttttagcggatgaaggtgttaaaaaatcagtatttgatgtgaagcgttcacgt
gttgcgttaatgtggcaaggatttgatttacgtggtgttgattttgacttattattagcg
acatatgtcattaatccaacgaatgtaagtaatgaattcaaaaaagtagctctacattat
gattatgacgatgtgttatatgatgaagaagtgtatggaaaaggggcgaaacgtgccgtt
gcaccgatcgagaaagtggcccaacattccattgatattgcaactgctgtgtttaagtta
aaagaaaccgcgattgagcaattaaaagaacaagagcagttaagtttatttgaagagatg
gaaatgcctcttgctgaagtactagcagtgatggagtataacggaatgtctcttgatcta
acgacattagatgaaatgggtcaagatttaaaagggcgtattgaagcattagaatcccaa
atctttgatcatgtgggagcaccgtttaatatcaattcaccgaagcaattaggagaggta
ttattcgaaaaattagggttaccggttgttaagaaaacgaaaacaggctattcaacgaat
gcagatgtattagaaaagttaagtgatgctcatccaattattaaattaattatggagtat
cgtacgttaacgaaattgtattcgacttatattgaagggttgaaaaaagcgtgctatgaa
gatggaaaagtccacacgattttcaaccaggcgctgactcaaaccggacgtctttcttca
attgaaccaaatcttcaaaatattccgattcgcttagaggagggacgcatgattcgtcgt
gcgtttgtgccaagtcaagaaggatgggtgattttaggagctgactactcgcaaatcgaa
cttcgaattttagctcatatttcaaataccgagtcgttaattgatgccttcaaacatgga
gaggatattcataagaaaacagcgatggatgtctttaaagtgtcagaagaagagatgaca
tcagatttacgtcgctcagcgaaagcgattaacttcgggattatttatggaatgagtgcc
ttcggcttatcggaaaatttaaatattacacaaaaagaggcgaaaaaatatattgatcat
tatttagaaacttactcaggaattcatcagtatatggaagatacagtgaagtatgcgaag
tttaatggttatgtctcaacgttatttaaccgtcgtcgttatattcctgaattaacacag
aaaaactatgcgattcgtcaatttggtgagcgtaccgcaatgaatgctccaattcagggg
acagctgccgatatcatcaaaaaagcgatgattgatgttcatcaagcgatgcttgagaaa
aacgtaaaatcacgtttattacttcaagtacacgatgaattaatctttgaagttccacaa
gaagaactagatatgatgattgaattagtgacgaaaacaatggaaaacgtcgtcgaactc
caagttccattaaaagccgactactcatacggaccaacttggtacgatgctaagtaa
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