Turicibacter bilis: J0J69_05545
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Entry
J0J69_05545 CDS
T08328
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tbb
Turicibacter bilis
Pathway
tbb03030
DNA replication
tbb03430
Mismatch repair
tbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0J69_05545 (dnaE)
03430 Mismatch repair
J0J69_05545 (dnaE)
03440 Homologous recombination
J0J69_05545 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbb03032
]
J0J69_05545 (dnaE)
03400 DNA repair and recombination proteins [BR:
tbb03400
]
J0J69_05545 (dnaE)
Enzymes [BR:
tbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0J69_05545 (dnaE)
DNA replication proteins [BR:
tbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J0J69_05545 (dnaE)
DNA repair and recombination proteins [BR:
tbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J0J69_05545 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
ERCC3_RAD25_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UUF07245
LinkDB
All DBs
Position
complement(1136415..1139456)
Genome browser
AA seq
1013 aa
AA seq
DB search
MGFTHLQVRSAYSLLNSSIKLADYVSLATLNQFKSLALVEEGSMHSAIKFYIACQKAGIK
PIIGMSLKIRGEGFEDEWTLLAKNSKGYETLLKLASLTALEDGGADVEEVIAQSSNLIVI
TSGERGVLVSAIEQHQEERLNRYYHQYLKRLEHLYIGLLRVNHLTYEVSRHLIHWSERVG
LKTVALNDVRYIRKEDAKTLTFLRAIKENQSIGQTDIQDVERYFKTEEEMRALFADCPQA
IDMTEEIVASCTVKIPLHQQLLPKFPTPEGASSDSYLEALCYKGLMKRYGDNLSPVHKNR
LSYELSIIKEMGFADYFLIVWDFIKYAKMNQIFVGPGRGSAAGSIVSYVLGITNVDPIKY
NLLFERFLNPERISMPDIDIDFQDNRRDEVIQYVQTKYGSRCVVQIATFGTFQSRSAWRD
LARIHDVETQLINKVAGYIYSGVTLKDIYEQSRELREFFSSYPKLEVIYQEAMKIEGLPR
HTSIHAAGVIISDHDLTDYTAIMEGPTGVYVSQYEAEDLEAIGLLKMDFLGLKNLNMLQQ
IITLIKKKSDPTFDLTAIDSNDAKTYEMIAKGQTTGVFQLESEGMRQVLKKVCPTSLEDI
VACNALFRPGPMESIPLFAARKHHEQPVDYYHPSLQGILHNTYGIIVYQEQIMQIANVVS
GYTLGEADVLRRAVSKKKKDVLEEEERKFVAKAVERGYPIEIASQLYALILKFANYGFNR
SHAVAYSMIAYQMAYLKAHYPAYFMSVALTNVIGSERHTSQYIREAKQLNLSILPPSVNK
SGLSYQIEENQIRFSLLPIKHIGLNLARQLIEEREAGLFKSVYDFVVRTRRFMNQRAYEG
LIDVGALDEFGYNRTTLHHNLGAILDFSKYDGGLFETDFEIQVLHKDLSKLEMMKREKEL
LGFYLNSHPIHMLAKAAQENGWYYPSDIMNINLSQATFIGFVEKFREIRDKKGKLMAFMD
ITDEHMSLTVTVFSDVYTSEYKSLLGKVIAVNGRINMRNNEKNLNLSKIIAVS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgggatttacacatttacaggtacggtcagcctattctttattaaatagttctatcaaa
ttagctgattatgtgagtttagccactttaaatcaattcaagtcattggctttagtcgaa
gaagggtcgatgcatagtgcgataaagttttatattgcatgtcaaaaagcagggattaaa
ccgattattgggatgagtttgaagattagaggtgaaggttttgaagatgagtggacgtta
ttagctaaaaatagtaaaggttatgaaactttattaaagttagcttctttgacagcacta
gaagatgggggagctgatgttgaagaggtaatcgcacaatcatcaaacttgatcgttatt
acgagtggcgaacgtggtgttttagtttctgctattgagcagcatcaagaagaacgttta
aatagatattatcatcagtatttaaagcgccttgaacatctctatattggacttttacgt
gttaatcatctgacgtatgaagtctctcgccatctgattcattggtctgaaagggttgga
ctaaagacagtggccttaaacgatgtacgttatattaggaaagaagatgcaaaaacttta
acctttttgagagccattaaagagaatcaatcgattggtcaaactgacattcaagatgtg
gagcgatattttaaaacggaagaggagatgcgtgctttatttgctgattgtccgcaggcc
attgatatgacagaggagattgttgctagctgtacagtaaagattccgttacatcagcaa
ttgttaccgaagtttcctacgcctgagggagcctcttctgatagttatttagaggcatta
tgttataaagggttgatgaaacgttatggtgataacctgtcacctgttcataaaaatcgt
ttgagttatgagctgtctatcattaaggaaatgggatttgctgattatttcttgattgtt
tgggattttattaagtatgcgaagatgaatcaaatttttgttggcccgggtagggggtct
gctgctggatcgattgtgtcttacgttttaggaattactaatgtcgatccaattaaatat
aatcttttatttgaacgatttttaaatcctgaacgtatatccatgccagatattgacata
gattttcaagataatcgacgtgatgaagtgattcaatatgtacagactaagtatggttct
agatgtgttgttcagattgcgacatttggaacatttcaatcacgttccgcttggcgtgat
ttagcgcgtattcatgatgttgagactcagttaattaataaagtagcgggatatatttat
tctggcgttacattaaaggatatttatgaacaaagtcgtgagttacgagagttcttttca
agttatcccaagctagaagtgatttatcaagaagcaatgaaaattgaggggttacctcgt
catacttcaattcacgctgcaggggtcattattagtgatcatgatttaacggattataca
gcgattatggaaggaccaacaggagtttacgtgtcgcaatatgaagcggaggatttagaa
gcgattggtctattaaagatggattttttaggacttaaaaatttaaacatgcttcaacaa
atcattacattgattaagaagaagtctgatccaacgtttgatttaacggctattgattct
aatgatgcgaagacttacgagatgattgcgaaggggcagacaactggggtgtttcaacta
gagtctgagggaatgcgtcaagttttaaagaaagtttgtccaacgtctttagaagatatt
gtggcatgtaatgctttatttagaccgggacccatggagagtattcctctttttgcggcc
cgtaaacatcatgaacagccagtggattattatcacccgagtttacagggtatcttacat
aacacttatggaatcattgtttatcaagaacagattatgcaaattgccaatgtcgtttct
ggctatacattaggagaagctgatgttttacgacgcgcagtttcgaaaaagaaaaaggat
gtattagaggaagaagagcgaaagtttgtggctaaagcagtcgaacgaggttatccaatt
gaaattgccagtcaactatatgctcttattttaaagtttgcgaattatggatttaatcgt
agtcatgccgtagcatatagtatgattgcttatcaaatggcatacttaaaagcacattat
cccgcttattttatgagtgttgctttaacgaatgtcattggaagtgagcgtcatacttca
cagtatattcgtgaagctaagcaattaaacttatctatcttacctccttctgtgaataag
agtggtttgagttatcagattgaagaaaatcaaattcgatttagcttgttaccgattaag
catattggtttgaatttagcgcgtcaattaattgaggaacgtgaagcgggattgtttaaa
tcggtatatgactttgttgttaggacaagacgatttatgaatcagcgagcatatgaagga
ttaattgatgttggagcattagatgagtttggatataatagaacaacactacatcataat
ttaggagctatcttagatttttcaaagtatgatggtgggttattcgagactgattttgaa
attcaagttttacacaaggatttatcaaagctagaaatgatgaagcgtgagaaagaatta
ttaggattttacttaaattctcatccgattcatatgctagcaaaagctgcccaggaaaat
ggctggtattatccaagtgacattatgaatattaatctatcacaagctacttttatcgga
tttgtagaaaaatttagagaaattagagataaaaaaggaaagttgatggcatttatggat
attactgatgaacacatgtcattaactgtaacggttttctcagatgtctatacaagtgag
tataaaagtcttttaggaaaagtgatagcggttaacggaagaattaatatgcgaaataat
gaaaaaaatctcaatcttagcaaaataatagcggtttcatga
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