Turicibacter bilis: J0J69_08715
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Entry
J0J69_08715 CDS
T08328
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tbb
Turicibacter bilis
Pathway
tbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0J69_08715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbb03019
]
J0J69_08715
03009 Ribosome biogenesis [BR:
tbb03009
]
J0J69_08715
Enzymes [BR:
tbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J0J69_08715
Messenger RNA biogenesis [BR:
tbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J0J69_08715
Ribosome biogenesis [BR:
tbb03009
]
Prokaryotic type
rRNA helicases
J0J69_08715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
AAA_30
Rep_fac_C
AAA_19
CobA_CobO_BtuR
DUF1904
Motif
Other DBs
NCBI-ProteinID:
UUF05175
UniProt:
A0A9Q9FG73
LinkDB
All DBs
Position
complement(1799365..1800978)
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AA seq
537 aa
AA seq
DB search
MTEITFKDLALSPAILKAIEEIGYVKPSPIQAEAIPVVLSGKDIIGQAQTGTGKTAAFML
PILEKIDPKNRNVQALVLCPTRELAVQVHEESKKFARNMRDVHILSIYGGQSYDPQIRAL
KKGVQIVVGTPGRVMDHMRRGTLKLENLKMLVLDEADEMLNMGFKDDIEEILEKTPESRQ
TVMFSATMAREIMNIAKTYQKSPEIVKVVSEELSNKKIDQYFVEVKRQDRVHAMIRCIDM
MGLTSSIVFTNTKREVDELVSKLQEEGYVTEGLHGDLKQAQRDRVMNSFRRKNVNILVAT
DIAARGIDVSNVEAVFNYDIPLNEENYVHRIGRTGRAGMTGLSITFVFGKDMFRIRRIED
YTKTKMSKMPIPTVEQIQEKRSSNVIEDVIANLEGQDFTKENELIAAILEKGYSLEQVAA
GLLRMNIGQSTKEYAHIEEVTSNNKSKGMRKNEVRLFVNVGSKQKVKAKDFVGMLTKKSD
IPARAIGDIDVYKKFSFINVDKAHANAIIRKLNSKLINGKPVRAEKTAPGATAPKGR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaattacatttaaagatcttgctttatcgcctgcaattttaaaggcaattgaa
gaaattggttacgttaaaccatcaccaatccaagcagaggcaatcccagttgtattatct
ggaaaagatattatcggacaagcacaaacaggaacaggaaaaactgctgcattcatgtta
ccaatccttgagaaaatcgatcctaagaatcgcaacgttcaagcattagtattatgtcca
actcgtgaattagctgtccaagttcatgaagaatctaaaaagttcgctcgcaatatgcgt
gacgtgcacattttatcaatctatggaggacaatcatacgatcctcaaatccgcgcgctt
aaaaaaggtgttcaaatcgttgttggtacgccagggcgtgttatggaccacatgcgccgt
ggaactttaaaattagaaaacttaaaaatgttagttttagatgaagctgatgaaatgtta
aacatgggattcaaagatgatatcgaagaaatcttagaaaaaactcctgaatctcgtcaa
acagttatgttctcagcgacaatggcacgtgaaatcatgaacatcgctaaaacttatcaa
aaatctcctgaaatcgttaaagttgtttcagaagaattatcaaacaaaaaaatcgatcaa
tacttcgttgaagtaaaacgtcaagaccgcgttcatgcaatgatccgttgcatcgatatg
atgggattaacttcatcaatcgtgttcacaaacactaaacgtgaagttgatgaattagtt
tctaaattacaagaagagggatacgtaactgaagggttacacggagatttaaaacaagct
caacgtgaccgcgttatgaatagcttccgtcgtaaaaacgttaatatcttagtagcaact
gatattgcagctcgtggaatcgacgtaagcaacgttgaagcagtattcaactacgatatt
cctttaaatgaagaaaactatgtacaccgtatcggacgtacaggtcgtgcaggtatgact
ggattatcaattacatttgtattcggaaaagatatgttccgtatccgtcgtatcgaagac
tatacaaaaacaaaaatgtctaaaatgcctatcccaacagttgagcaaatccaagaaaaa
cgttcaagtaacgttatcgaagatgtgattgctaacttagaaggacaagactttacaaaa
gaaaacgaattaattgctgcaatcttagaaaaaggatacagcttagaacaagttgctgca
ggattattacgtatgaacattggtcaaagtacgaaagagtacgcacatatcgaagaagtg
acatcaaacaataaatctaaaggtatgcgtaaaaacgaagttcgtttattcgtaaacgtt
ggatctaaacaaaaagttaaagctaaagacttcgttggaatgttaacgaaaaaatcagat
atcccagctcgtgcaatcggagatatcgatgtttataaaaaattctcattcattaatgta
gataaagcacatgcaaatgcaattatccgtaaattaaactctaaattaattaacggtaaa
ccagttcgtgctgaaaaaactgcaccaggtgcaacagctccaaaaggtagataa
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