Turicibacter bilis: J0J69_09860
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Entry
J0J69_09860 CDS
T08328
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tbb
Turicibacter bilis
Pathway
tbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0J69_09860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbb03019
]
J0J69_09860
Messenger RNA biogenesis [BR:
tbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J0J69_09860
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
UUF05384
UniProt:
A0ABY5JFC3
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Position
complement(2030206..2031870)
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AA seq
554 aa
AA seq
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MEETQKLKVIPLGGLGEIGKNMTAIEYDDELIVIDCGIAFPDEDMYGVDLIIPDISYLIE
NESKLKGIFITHGHEDHIGAIPFILKQVNIPIYGTRLTIGLIENKLKEHGLLATTSLNII
KPRESAKFNHLEVEFIRNTHSIADSCSLAIHTPVGIIFHTGDFKVDLTPIDNEPMDFERI
SELAKEGILLLMSDSTNVERKGYTMSERVISETFTKLFEHATGRIIVATFASNIHRMQQI
IDASKRYNRKVAFSGRSMENISKVATELGYLHIDDDQLVNIHNINSVADDELTLIVTGSQ
GEPMGALARIAFSNHRHIKLKPNDLFIISASPIPGNDKLIGRVINELYRKGCNVIYKDLE
AVHVSGHACQEELKLILRLTHPKFFMPVHGEYRHLVHHKNLAEKVGIPKDNILVLSTGQV
LELTPYSAEVNGRVRTGAIFVDGIGVGDVGNVVLRDRRMLAEGGMLIVVATIDKESKTLV
SEPYIVTRGFVYVKESEDLMNEVKQITQTEIEMLLENETNEILVMKNRIKKALERYLYEK
TKRRPSIFPIIMEV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaactcaaaaacttaaagtcatcccacttggtggtcttggtgagattggtaaa
aatatgactgctattgaatatgatgacgaactcattgtcattgattgcggaatcgccttt
cctgatgaagatatgtatggagttgatttaatcattccagatatctcataccttattgaa
aatgaatcgaaacttaagggaatcttcatcacacatggtcatgaagatcatattggagct
attcccttcatcttaaaacaagtcaatatccccatctatggaacacgactaaccattggt
ttgattgaaaataaactaaaagagcacggattactagctacaacctcactaaatatcatt
aaacctcgtgaaagtgctaagtttaatcatttagaagtggaatttattcgtaacacccat
agtatcgcagattcttgttcactagccattcatacccctgtcggaatcatcttccatact
ggggatttcaaagttgacttaactccaattgataatgagccgatggattttgaacgtatc
tctgaacttgctaaagaaggaattcttcttctgatgtcggatagtacaaacgttgagcgt
aaaggctatacgatgtccgaacgtgtaatcagtgagacttttacaaaactctttgaacat
gccacaggtcgtattattgtcgccacgtttgcatcaaatattcatcgtatgcaacaaatc
attgatgcatctaaacgatataaccgtaaagttgcttttagtggacgtagcatggaaaat
atctctaaagtcgccactgaactgggctatcttcatatcgatgatgaccaacttgttaat
atccataatattaatagtgtagcagatgatgaattaacgttaattgtgacaggtagtcaa
ggcgaaccaatgggcgctttagcacgtattgctttctctaatcatcgccacattaagtta
aaaccaaatgacctattcattatttcagcttcaccaattccgggaaatgacaaattaatt
ggacgtgtcatcaatgagctctatcgtaaaggatgtaacgtcatctacaaagatttagaa
gctgttcacgtatcaggtcatgcctgccaagaagaactcaaactaatacttagactaacc
catccgaaattctttatgccggttcacggagaataccgacatcttgttcatcataaaaat
cttgctgaaaaggttggaattccgaaagacaacattcttgtcttatccacaggtcaagtt
cttgagctaacaccttacagtgctgaagttaatgggcgtgttcgtacaggagctatcttc
gtggatggaatcggtgttggagatgttggaaatgttgtcttacgcgaccgccgaatgctt
gccgaaggtggaatgttaatcgttgtcgccacaattgataaagaatcaaaaacattagtc
agtgagccttatattgtaacacgtggatttgtttatgttaaagaatcagaagatttaatg
aacgaagtcaaacaaattactcaaaccgaaattgaaatgcttcttgaaaatgaaacaaat
gaaattctcgtgatgaaaaaccgtattaaaaaagcactcgaacgttacttgtatgaaaaa
acaaaacgtcgtccaagtatcttcccaattatcatggaagtctga
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