Turicibacter bilis: J0J69_13030
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Entry
J0J69_13030 CDS
T08328
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tbb
Turicibacter bilis
Brite
KEGG Orthology (KO) [BR:
tbb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J0J69_13030 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbb03021
]
J0J69_13030 (rpoD)
Transcription machinery [BR:
tbb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J0J69_13030 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_10
Sp-DndD
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UUF05937
UniProt:
A0A9Q9CNI6
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All DBs
Position
2700443..2701813
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AA seq
456 aa
AA seq
DB search
MSNPVLDEKKILEINNQLIKLGKKRGYLTYDEINNNFEQVHLDPEMISSFLDLYDAEGID
IVKSEKIVEPEVAQAEEEETVLILPDFDNEDEDDENIPADFNAEDEVDLEEKFDDFEFTS
QFKINDPVRMYLKEIGRVELLSSQEEINFAKKIERGDISTEILDLRRRNEELPAELLERI
DSLIKDAGEANDGNEFLIGITELSDEEARRVIHEGEYAKKRLVEANLRLVVSIAKRHVGR
GMLFLDLIQEGNMGLIKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMV
ETINKLVRIQRQLVQELGREPLPEEISEKMGISPEKVREILKISQEPVSLESPVGEEDDS
HLGDFIPDADALSPSEFASNEMLKKELDDVLETLTDREERVLRLRFGLEDGRTRTLEEVG
KEFGVTRERIRQIEAKALRKLRHPSRSRRLKDFMEE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatccggtacttgacgaaaaaaagattttagaaattaataatcaattaatcaag
ttaggaaaaaaacgtggttatttaacatacgatgaaatcaataataactttgaacaagtt
catttagacccagaaatgattagttcatttttagatttatatgatgcagaaggaattgat
atcgttaaatcagaaaaaattgttgaaccagaagttgctcaagcagaagaggaagaaaca
gttttaatcttacctgatttcgataacgaagatgaagatgatgaaaacatcccagctgac
tttaatgctgaggatgaagtagatttagaagaaaaattcgatgattttgagtttacatca
cagtttaaaatcaacgatccagttcgtatgtacttaaaagagatcggacgtgttgaatta
ttatcaagccaagaagagattaactttgcgaagaaaattgagcgcggagatatttcgact
gagattttagatttacgtcgtcgcaatgaagagcttccagctgaattattagagcgtatt
gactctttaattaaagatgctggagaagcaaatgatggaaatgaattcttaattggaatt
actgagttaagtgatgaagaagcacgtcgcgtgattcatgaaggtgagtacgcgaaaaaa
cgtctagttgaagcaaacttacgtttagttgtaagtattgcaaaacgtcatgtgggacgt
ggaatgttattcttagacttaatccaagaaggaaacatgggattaattaaagccgttgaa
aagtttgactaccgtaaaggattcaaattctcaacatatgcaacatggtggattcgtcaa
gctatcactcgtgcgattgctgaccaagcacgtacaattcgtatcccagttcacatggtt
gaaacaattaataaattagttcgtattcaacgtcaattagttcaagaattagggcgtgaa
ccattaccagaagaaatctcagaaaaaatgggaatttcacctgagaaagttcgtgaaatc
ttaaaaatctctcaagaacccgtttcattagaatcaccagtaggtgaagaagatgattca
cacttaggagatttcattccagatgcggatgcattatcaccatctgagtttgcttctaac
gaaatgcttaaaaaagaattagatgatgtcttagaaacgttaaccgatcgtgaagagcgc
gtgttacgtttacgctttggacttgaagatggacgcacacgtacacttgaagaagtcgga
aaagaattcggtgtaactcgtgaacgtattcgtcagattgaagcaaaagcattacgaaaa
ctacgccatccttctcgtagccgtcgcttaaaagacttcatggaagaatag
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