Thermus brockianus: A0O31_00233
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Entry
A0O31_00233 CDS
T04600
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tbc
Thermus brockianus
Pathway
tbc03030
DNA replication
tbc03410
Base excision repair
tbc03420
Nucleotide excision repair
tbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0O31_00233
03410 Base excision repair
A0O31_00233
03420 Nucleotide excision repair
A0O31_00233
03440 Homologous recombination
A0O31_00233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbc03032
]
A0O31_00233
03400 DNA repair and recombination proteins [BR:
tbc03400
]
A0O31_00233
Enzymes [BR:
tbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0O31_00233
DNA replication proteins [BR:
tbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A0O31_00233
DNA repair and recombination proteins [BR:
tbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A0O31_00233
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0O31_00233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
TraI_hel_assoc_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
APD08456
UniProt:
A0A1J0LQA5
LinkDB
All DBs
Position
complement(226032..228524)
Genome browser
AA seq
830 aa
AA seq
DB search
MLPLFEPKGRVLLVDGHHLAYRNFFALKGLTTSRGEPVQGVYGFAKSLLKALKEDGDVVI
VVFDAKAPSFRHEAYGAYKAGRAPTPEDFPRQLALMKELVDLLGLERLEVPGFEADDVLA
ALAKKAEREGYEVRILTADRDLFQLLSDRIAVLHPEGHLITPGWLWERYGLRPEQWVDFR
ALAGDPSDNIPGVKGIGEKTALKLLKEWGSLENIQKNLDQVSPPSVREKIQAHLDDLRLS
QELSRVRTDLPLEVDFRRRREPDREGLRAFLERLEFGSLLHEFGLLESPQAAEEAPWPPP
EGAFLGFRLSRPEPMWAELLSLAASAKGRVYRAEAPHKALSDLKEIRGLLAKDLAVLALR
EGLGLPPTDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERALLAERLYENLLSRLKG
EEKLLWLYEEVEKPLSRVLAHMEATGVRLDVPYLRALSLEVAAEMGRLEEEVFRLAGHPF
NLNSRDQLERVLFDELGLPPIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELAKLK
GTYIDPLPALVHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFVAEE
GYLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTQTASWMFGLPAEAIDPLRRRAA
KTINFGVLYGMSAHRLSQELGIPYEEAVAFIDRYFQSYPKVKAWIERTLEEGRQRGYVET
LFGRRRYVPDLNARVKSVREAAERMAFNMPVQGTAADLMKLAMVRLFPRLPEVGARMLLQ
VHDELLLEAPKERAEEAAALAKEVMEGVWPLAVPLEVEVGIGEDWLSAKG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctttgagcccaagggccgggtgctcctggtggacggccaccacctggcc
taccgtaacttcttcgccctcaaggggctcaccacgagccggggcgagcccgtgcaaggg
gtctacggcttcgccaaaagcctcctcaaggccctgaaggaggacggggacgtggtcatc
gtggtctttgacgccaaggccccctcttttcgccacgaggcctacggggcctacaaggcg
ggccgggcccctaccccggaggactttccgaggcagcttgccctcatgaaggagcttgtg
gaccttttggggctggagcgcctcgaggtcccgggctttgaggcggacgatgtcctcgcc
gccctggccaagaaggcggagcgggaagggtacgaggtgcgcatcctcaccgccgaccgg
gacctcttccagcttctttcggaccgcatcgccgtcctgcacccggaaggccacctcatc
accccggggtggctttgggagaggtacggcctgagaccggagcagtgggtggacttccgc
gccctggccggcgacccttccgacaacatccccggggtgaaggggatcggcgagaagacg
gccctgaagctcctaaaggagtggggtagtctggaaaatatccaaaaaaacctggaccag
gtcagtcccccttccgtgcgcgagaagatccaggcccacctggacgacctcaggctctcc
caggagctttcccgggtgcgcacggaccttcccttggaggtggactttagaaggcggcgg
gagcccgatagggaaggccttagggccttcttagagcggcttgagttcgggagcctcctc
cacgagttcggcctcctggaaagcccccaggcggcggaggaggccccttggccgccgccg
gaaggggccttcttgggcttccgcctctcccggcccgagcccatgtgggcggaactcctt
tccttggcggcaagcgccaagggccgggtctaccgggcggaggcgccccataaggccctt
tcggacctgaaggagatccgggggcttctcgccaaggacctcgccgtcttggccctgagg
gaggggctcggccttccccccacggacgatcccatgctcctcgcctacctcctggacccc
tccaacaccacccccgagggcgtggcccggcgctacgggggggagtggacggaggaggcg
ggggagagggccttgcttgccgaaaggctttacgagaacctcctaagccgcctgaaaggg
gaagaaaagctcctttggctctacgaggaggtggaaaagcccctttcccgggtcctcgcc
cacatggaggccacgggggtgaggctggacgtaccctacctaagggccctttccctggag
gtggcggcggagatgggccgcctggaggaggaggttttccgcctggcgggccaccccttc
aacctgaactcccgcgaccagctggaaagggtgctctttgacgagctcgggcttcccccc
atcggcaagacggaaaaaaccgggaagcgctccaccagcgccgccgtcctcgaggccctg
cgggaggcccaccccatcgtggagaagatcctccagtaccgggagctcgccaagctcaag
ggcacctacattgacccccttcccgccctggtccaccccaggacgggcaggctccacacc
cgcttcaaccagacggccacggccacgggccgcctttccagctccgaccccaacctgcag
aacattcccgtgcgcacccccttgggccaaaggatccgccgggccttcgtggccgaggag
gggtaccttctcgtggccctggactatagccagattgagctgagggtcctggcccacctc
tcgggggacgaaaacctcatccgggtcttccaggagggccgggacatccacacccagacg
gcgagctggatgttcggcctgccggcggaggccatagaccccctcaggcgccgggcggcc
aagaccatcaacttcggcgtcctctacggcatgtccgcccaccggctttcccaggagctg
ggcatcccctacgaggaggcggtggccttcattgaccgctatttccagagctaccccaag
gtgaaggcctggattgaaaggaccctggaggaggggcggcaaagggggtacgtggagacc
ctcttcggccgcaggcgctacgtgcccgacctcaacgcccgggtaaagagcgtgcgggag
gcggcggagcgcatggcctttaacatgcccgtgcagggcaccgccgctgacctgatgaag
ctcgccatggtgaggctcttccctaggcttcccgaggtgggggcgaggatgctcctccag
gtccacgacgagctcctcctggaggcgcccaaggagcgggcggaggaggcggcggccctg
gccaaggaggtcatggagggggtctggcccctggccgtgcccctggaggtggaggtgggc
atcggggaggactggctttccgccaagggctag
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