Thermus brockianus: A0O31_00755
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Entry
A0O31_00755 CDS
T04600
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tbc
Thermus brockianus
Pathway
tbc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0O31_00755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbc03400
]
A0O31_00755
Enzymes [BR:
tbc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A0O31_00755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A0O31_00755
DNA repair and recombination proteins [BR:
tbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0O31_00755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zn_ribbon_Nudix
DZR
Zn_ribbon_6
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
APD08936
UniProt:
A0A1J0LRN2
LinkDB
All DBs
Position
714884..715678
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AA seq
264 aa
AA seq
DB search
MPELPEVETTRRRLLPLLQGKPLLRVRHQDPGRYRHTERAEGARLLDLGRRGKFLLFALS
GGLEMVVHLGMTGGFRLEATPHTRLTLEFPSLLLHFHDPRRFGRLWVVERGDYREIPLLG
RLGPEPLSEGFQLEGFLQGLRRSAKPLKALLLDQTLAAGVGNIYADEALFRARLHPLRPA
QELSPGEGERLYRALREVLAEALALGGSTLSDRTYQQPDGRPGSFQERHAVYGREGLPCP
ACGTPIRRQVVAGRSTHFCPRCQG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaggtggagaccacaagaaggcgcctcctccccctcctccagggg
aaacccctcctaagggtgcgccaccaggaccccggccgctaccgccacacggaacgggca
gaaggagcgcgcctattggacctcgggcgccggggcaagttcctcctcttcgccctttcc
ggggggctggagatggtggtccacctggggatgacggggggcttccgcctcgaggccacc
ccccatacccggctcaccctggagtttccctcccttctcctccacttccacgacccccgg
cgcttcggccgcctctgggtggtggaacggggagattaccgggaaatccccctcctgggc
cgcctcggccccgagcccctttcggaaggtttccaactggaaggcttcctccaagggctt
cgccggagcgccaagcccctcaaggccctcctcctggaccagaccctggcggcgggggtg
ggcaacatctacgccgacgaggccctcttccgggcccgcctccaccccttgcgcccggcc
caggagcttagcccaggggaaggggaaaggctctaccgggccctacgggaggtcctcgcc
gaggccctcgcccttgggggaagcacgctttccgaccggacctaccaacagcccgatggc
cgcccagggagcttccaggagcgccacgccgtctacggacgggagggcctcccctgcccc
gcctgcggcacgcccatccggcggcaggtggtggcggggcggagcacccacttctgcccc
cgctgccagggctag
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