Thermus brockianus: A0O31_01395
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Entry
A0O31_01395 CDS
T04600
Name
(GenBank) DNA topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tbc
Thermus brockianus
Brite
KEGG Orthology (KO) [BR:
tbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbc03032
]
A0O31_01395
03400 DNA repair and recombination proteins [BR:
tbc03400
]
A0O31_01395
Enzymes [BR:
tbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A0O31_01395
DNA replication proteins [BR:
tbc03032
]
Prokaryotic type
DNA Topoisomerases
A0O31_01395
DNA repair and recombination proteins [BR:
tbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A0O31_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
DNA_ligase_ZBD
Lar_restr_allev
YhfH
DUF7575
DUF6011
TrmB
Motif
Other DBs
NCBI-ProteinID:
APD09516
UniProt:
A0A1J0LU50
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Position
complement(1275571..1278042)
Genome browser
AA seq
823 aa
AA seq
DB search
MPKKPTQGTSAPAKGGATTLVVVESPAKAKSIQKMLGPAYEVRASRGHVADLPERELGVD
VERGFAPTYEVKKDKKAVVEELKRAAQGKRLLIATDPDREGEAIGWHVARLLDRDPKEPI
RVEFHEITPKVVRQAVENPRPIDQNLVDAQQARRVLDRLLGYNLSPLLSLEFRKRALSAG
RVQSVALRLVVEREEEIEAFQKEGYWLLKGLFQAEGKAFPALLHEVDGKRLWTGQGEKEG
KLHLKTEAEAKALAEEARKRPYRVARVEVKERRKAPPPPFTTSTLQQAASSRLGYTASRT
MRIAQRLYEGVDLPEGTVGLITYMRTDSVRVSPEALALVREVIAERFGPNFVPEAPRFYK
NRKEGVQDAHEAIRPTDPRRTPESVRPYLSEEEYRLYDLIWRRFLASQMKDALYEQTAVV
LEGEGTPRLLFRASGSVLKFEGYLKAWGKEEEEEEPPVPAVPEGAPAKLLEITPEERFTE
PPPRYTDASLVKTMEELGIGRPSTYAPTLETLEKRGYVERRGRTLLPTPLGREVTHYLKE
RFPQVVAYEFTARMEDRLDEVEEGKAPWPQVVWEFYEPFLGELAQVPKKTCPRCGRPLEL
KVSRYGQFLGCTGYPACTYTEPLEKREAEPIGEACPKCGKPLLRKEGRYGSFIACSGYPA
CDYTRDDGRPTGHTCPKCGGRVLEKRSKRGKPYYKCEENTCDFLSFYPLLDQTCPSCSWP
LVKKGEGACINPSCPAHDPKLLPAPKTPGPAKGKGKAPSPPKLPQDFEALRAFLPSLKEE
ERQALEALAQGKKLAAEEATLAKRALFKLRMQKGRAKKEVAPA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaagcccacgcaagggaccagcgcaccggccaagggcggggccaccaccttg
gtggtggtggagtcccccgccaaggccaaaagcatccagaagatgctgggccccgcctac
gaggtgcgggcgagccgcggccacgtggccgacctccccgagcgggagctgggggtggac
gtggaacggggcttcgcccccacctacgaggtgaagaaggataagaaagccgtggtggag
gagctcaagcgggcggcccaaggcaagcgcctcctcatcgccaccgaccctgaccgggaa
ggggaggccatcggctggcacgtggcgaggcttttggaccgcgaccccaaggagcccatc
cgggtggaattccacgagatcacccccaaggtggtgcgccaggcggtggaaaacccccgc
cccattgaccagaacctggtggacgcccagcaggcccgccgggtcttggaccggctcctc
ggctacaacctctcccccctcctctccctggagttccgcaagcgggccctctccgccggc
cgggtgcagagcgtggccctgaggctcgtggtggagcgcgaggaggaaatagaggccttc
caaaaagaagggtactggctcctaaagggcctcttccaggcggaagggaaggccttcccc
gccctcctccacgaggtggacggaaagcgcctttggacggggcaaggggagaaggaggga
aagctccacctcaagacggaggccgaggccaaggccctggcggaggaggcccggaagcgc
ccctaccgggtggcccgggtggaggtgaaggaaaggcgcaaggctcctcccccccccttc
accacctccaccctccagcaagccgcaagcagccgcctaggctacaccgcaagccggacc
atgcgcatcgcccagcgcctctacgagggggtggacctccccgagggcaccgtgggcctc
atcacctacatgcgcacggactcggtgcgcgtatcccccgaggccctggccctagtccgg
gaggtcatcgccgaacgctttgggccgaacttcgtgcctgaagcccccaggttctacaaa
aaccgcaaggaaggggtgcaggacgcccacgaggccatccgccccaccgacccgaggcgc
accccggaaagcgtccgcccgtacctctccgaggaggagtaccgcctctacgacctcatc
tggcggcggtttctggcgagccagatgaaggacgccctctacgagcagacggcggtggtc
ctcgagggggaaggaaccccccgcctcctcttccgcgcctcgggctcggtgctcaagttt
gaaggctacctgaaggcctggggcaaggaggaagaggaggaggagcccccggtgcccgcg
gtgccggaaggggccccggcaaagcttttggaaatcacccccgaggagcgcttcaccgag
cccccgccccgctacacggacgccagcctggtgaagaccatggaagagctgggcatcggc
cgcccctccacctacgcccccaccctggaaaccttggaaaaacgggggtacgtggagcgc
agggggcgcaccctcctccccacccccctgggccgggaggtgacccactacctcaaggaa
cgcttcccccaggtggtggcctacgagttcaccgcccgcatggaagaccgcctggacgag
gtggaggagggcaaggccccttggccccaggtggtctgggagttttacgagcccttcttg
ggggagctcgcccaggtgcccaagaagacctgcccccggtgcggccgtcccctggagctc
aaggtgagccgctacgggcagttcttgggctgcaccggctacccggcgtgcacctacacc
gagcccctggaaaaacgggaggcggagcccatcggggaagcctgccccaagtgcggcaaa
cccctcttgcgtaaagaaggccgctacgggagcttcatcgcctgctccggctacccggcg
tgcgactacacccgggacgatggccgccccacggggcacacctgccccaagtgcggcggc
cgggtactggaaaagaggagcaagcggggcaagccctactacaagtgcgaggagaacacc
tgcgacttcctctccttctaccccctcctggaccaaacctgcccaagttgcagctggccc
ctggtgaaaaagggagagggtgcctgcatcaacccaagctgcccggcccacgaccccaag
ctccttcccgcccccaaaaccccaggccccgccaagggcaagggcaaggccccaagcccc
cctaagctcccccaggactttgaggccctaagggcctttctcccgagcctgaaagaggaa
gaacgccaagcgctggaggccttggcccaggggaagaagcttgctgcagaggaagccacc
ttggccaagcgggccctcttcaagctccggatgcaaaagggccgggccaagaaggaggtg
gcccccgcctga
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