Thermus brockianus: A0O31_01694
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Entry
A0O31_01694 CDS
T04600
Name
(GenBank) RNA polymerase pricipal sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tbc
Thermus brockianus
Brite
KEGG Orthology (KO) [BR:
tbc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A0O31_01694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbc03021
]
A0O31_01694
Transcription machinery [BR:
tbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A0O31_01694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Exonuc_VII_L
DUF7008
RNA_pol_Rpb5_C
HTH_3
HNH_repeat
KORA
Motif
Other DBs
NCBI-ProteinID:
APD09802
UniProt:
A0A1J0LUL3
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Position
complement(1524806..1526122)
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AA seq
438 aa
AA seq
DB search
MKKAKTKKTKVQETEAKDTLTALEALPEAEAPGEDLADLPDPDPELLEAEGDLALLDEGL
DLDADLLLPEAEGEEVFEEAEEEELVLPKVSTSDPVRQYLHEIGQVPLLTLEEEIELARK
VEEGMEAIKKLSEATGLDQDLIREVVRAKILGTARIQEIPGLKGRLDPQTVEEVDQKLKS
LPKELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVE
KFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGRE
PTYEEIAEAMGPGWDAKRVEETLKIAQEPVSLETPIGDEKDSFYGDFIPDEHLPSPVEAA
AQSLLSEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAYFGVTRERIRQIENKAL
RKLKYHESRTRKLRDFLD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaggccaagaccaagaagacgaaggtgcaggagaccgaggccaaggacaccctc
accgccttagaagcccttccggaggcggaggccccgggggaggacctcgccgacctcccc
gaccccgatcccgagctcttggaagccgagggggacctcgcccttttggacgaagggctg
gacttggacgccgacctcctcctccccgaggcggagggtgaggaggtttttgaggaggcg
gaggaggaggaactcgtccttcccaaggtttccacctctgaccccgtgcgccagtacctg
cacgagatcgggcaggtgcccctcctcaccctggaagaggagattgagctcgcaaggaag
gtggaggagggcatggaggccatcaagaagctctccgaagccacggggctggaccaggac
ctcatccgcgaggtggtgcgggccaagatcctgggcaccgcccgcatccaggaaatcccc
ggcctcaagggcaggctggacccccaaacggtggaggaggtggatcagaagctaaaaagc
ctccccaaggagctcaagcgctacctgcacatcgcccgggaaggggaggcggcgcggcaa
cacctcattgaggccaacctgcgcctcgtggtctccatcgccaagaagtacacggggcgg
ggcctatcgttccttgacctcatccaggagggtaaccaaggcctcatccgggcggtggag
aagtttgagtacaagcgccgcttcaagttctccacctacgccacctggtggatccggcag
gccatcaaccgggccatcgccgaccaggcccgcaccatccgcatcccggttcacatggtg
gagaccatcaacaagctctcccgcaccgcaaggcaactgcagcaggagctgggccgggag
cccacctacgaggagatcgccgaggccatgggcccgggctgggacgccaagcgggtggag
gaaacccttaaaatcgcccaggaacccgtgtccctggaaacccccatcggggacgagaag
gatagcttctacggcgacttcatccccgacgagcaccttccctcccccgtggaggcggcg
gcgcaaagcctcctttccgaggagctggaaaaggccctctccaagctctccgagcgggag
gccatggtcctcaagctccgcaaggggctcattgacggccgggagcacaccctcgaggag
gtgggggcctacttcggcgtgacccgggaaaggatccggcagattgagaacaaggccctg
aggaagctcaagtaccacgagtcccgcacgcggaagctccgggacttcctggactga
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