Thermus brockianus: A0O31_01821
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Entry
A0O31_01821 CDS
T04600
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tbc
Thermus brockianus
Pathway
tbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0O31_01821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbc03019
]
A0O31_01821
03009 Ribosome biogenesis [BR:
tbc03009
]
A0O31_01821
Enzymes [BR:
tbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0O31_01821
Messenger RNA biogenesis [BR:
tbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0O31_01821
Ribosome biogenesis [BR:
tbc03009
]
Prokaryotic type
rRNA helicases
A0O31_01821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Hera_DD
Hera_RBD
ResIII
SNF2-rel_dom
ERCC3_RAD25_C
Cu_amine_oxidN2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
APD09912
UniProt:
A0A1J0LUL4
LinkDB
All DBs
Position
1639967..1641502
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AA seq
511 aa
AA seq
DB search
MEFKDFPLKEEIKEALARRGITAPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIA
QALEPSPTRGRKPRALILTPTRELALQVAGEVAAVAPHLKVVAVYGGTGYGKQKEELARG
ADVVVATPGRALDYLRQGVLDLSEVKIAVLDEADEMLSMGFEEEVEAILSATPAARQTLL
FSATLPSWARRLAERYMKAPVVINVVREEGVTYQEEAILAPGDRLALLSDILYVKAPKRA
IVFTRTKAETEEVATGLLRLGHPARAIHGDLSQTDRERVMRAFREGEVRILVATDVAARG
LDIPEVDLVVHYRLPDKAETYQHRSGRTGRAGRGGEVVVLYGAREKRELSELERAVGRTF
KRVNPPTPEEVLEAKWHHLLARLARVPERDFKPYLDFAGRLFAEGRVEVVAAIMALLLGG
APKEKSLLTGEEGWLTFKATGPRLTLPRLVALLKEQGLEVGKIAPGEEGFYVDLRPQDLP
RLAEVQGVRLERAKRVEALPEAAPSRRRVRA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaagattttcccctaaaggaagagatcaaggaagccttggcccggcggggc
atcaccgcccctacccccatccaggcggccgccctccccttggccctggagggcaaggac
ctcatcggccaggcccgcacgggtaccggcaagaccctggccttcgccctgcccatcgcc
caggccctggaaccgagccccacccgcggcaggaagcctagggccctgatcctcaccccc
acccgggaactggccctccaggtggcgggggaggtggcggcggtggccccccacctcaag
gtggtggcggtctacgggggcaccggctacggcaaacagaaggaggagcttgcccggggg
gcggacgtggtggtggccaccccggggcgggccctggactacctgcggcaaggggttttg
gacctttccgaggtgaaaatcgccgtcttggacgaggcggacgagatgctctccatgggc
tttgaggaggaggtggaggccatcctttccgctacccctgccgcgcggcagaccctcctt
ttctccgccaccttgccctcctgggcgagaaggctcgccgaacgctacatgaaggctccc
gtggtcatcaacgtggtgcgggaggagggggtcacctaccaggaggaggccatcctggcc
ccgggggaccggctggccctgctttccgacatcctgtacgtgaaggcgcccaagcgggcc
attgtcttcacccgcaccaaggcggaaaccgaggaggtggccacgggcctcttgcgcctg
ggtcacccggcccgggccatccatggggacctttcccagacggaccgggagcgggtgatg
cgggccttccgcgagggggaggtgcggattctggtggccacggacgtggccgccaggggc
ctggacattcccgaggtggacctggtggtccattaccgcctgcccgataaggcggaaacc
taccagcaccgttcgggacgcacgggccgggccggacgagggggcgaggtggtggtcctt
tacggggcccgggagaagcgggagctctccgagctggagcgggcggtgggccgcaccttc
aagcgggtgaatccccccacccccgaggaggtgttggaggccaagtggcaccacctcctg
gcccggctggcccgggtgccggagcgggactttaagccctacctggacttcgccgggagg
cttttcgccgaggggcgggtggaggtggtggccgccatcatggccctcctcttgggcggg
gcgcccaaggagaaaagcctcctcacgggggaggagggctggctcacgttcaaggccacg
gggcccaggcttaccctgccccggcttgtggccctcttgaaggagcagggcctcgaggtg
gggaagatcgcccccggggaggagggcttctacgtggacctccgcccccaggacctgccc
cggctcgccgaggtgcagggggtcaggctggagagggccaagcgggtggaggccctgccc
gaggccgcccccagccggcgccgggtgcgggcgtag
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