Thiobacillus denitrificans: Tbd_0033
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Entry
Tbd_0033 CDS
T00275
Name
(GenBank) conserved hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0033
Enzymes [BR:
tbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tbd_0033
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Tbd_0033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
MRFAP1
Motif
Other DBs
NCBI-ProteinID:
AAZ95986
UniProt:
Q3SMQ5
LinkDB
All DBs
Position
complement(32000..35269)
Genome browser
AA seq
1089 aa
AA seq
DB search
MREALDAAIALSPNRSAVVEACAGSGKTWLLVSRMLRLLLAGAAPSELLAITFTRKAAQE
MTDRLHEWLRVLALADDATVRAFLREREVPADEIDALLPRARGLLEAVLSAQPGPTVTTF
HGWFLDLLKRAPLEAGLPWGAPLLERESELLNEVRERLFARWAAAPASPEGAALLALLAS
LGEHNLRALLRNFIAARIEWQAFARDQADPVGYALGELQHCLQSELDADPVAAFWADPAL
RARVGRLGEALEKGSETERKKALAIREAIDAADVVQLRGLILKKDGERLAKKANASTLAA
LGAEADTFLRDYASVEDALEALARHQTDLRIRELNRHGLLLGHALFTAYQDAKRRQGVID
FADAEWLGCQLLMSEEYAPALAMKLDARYRHLLLDEFQDTNPLQWQALSTWLLEARGGGS
EMTVFMVGDPKQAIYRFRRGEARVFDAATDFLHSHFEAARFSTDMTRRLAPPVVAALNPV
FAGVTGFAEHRHAPQNAERPGALRVLPLQVEKTEPVTAGGLRNPLTTARTEAEDRVVDEE
ARVFARTLRDEILGRWGVIDKGTSRAAAPRDVIALVKKRTHLHVYERELEAARIPYITSR
RGGLLNALEARDLVALIECLLLPHADLKLAHVLKSPIFDCSDDDLLSVFAPQPDAGARGW
ERLLALAEAPHATAEAARAARLLPRWRERCGTLPVHDLLDHIYCEGDVEARYAAAVPPAR
RPQVEANLRAFMQLALTQDAGRYPTLAGFVRELASLIDDADASPDEGLAADGADAVRLLT
IHGAKGLEAPIVWLLGGSDRPHGESYGVLAPWPPDAPAPLHFSLFGKQDERGAGRQGSFD
EEKTLAEREADNLLYVALTRAEQALIVSGDAGKNAWVQRVEAAWHALDLPADLPVAAEAG
THNIELRTPIEAPPIGRRVASPGHNAAAASGEFFHACLEVHAPPGAPRKLAELAMHLGLE
REHARIEAEARALLARPELAHLFDPARYRRAYNELALLDRDGRLQRADRVVEGEDAVWLV
DYKMGEQSRLLSDTALAEAHRAQLAGYRSLLAALYPHKPVHAVLLLADGRLVEVDTDVAN
PLSFLEPRP
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaagcgctcgacgccgccatcgcgctctcgcccaaccgttcggcggtcgtcgaa
gcctgcgccggcagcggcaagacctggcttctcgtgtcgcgcatgctgcgcctgctgctc
gccggcgcggcgccgtcggaactgctcgcgatcaccttcacgcgcaaggcggcgcaggaa
atgaccgatcgcctgcacgaatggctgcgcgtgctggcgctcgcggacgacgcgaccgtg
cgcgcttttttgcgcgaacgcgaggtgccggccgacgagatcgacgcgctgctgccacgc
gcgcgcggactgctcgaagcggtactgagcgcgcagcccgggccgacggtgacgacgttt
cacggctggtttctcgacctcctcaagcgcgcgccgctcgaggccggcctgccctggggc
gcgccgctgctcgaacgcgaaagcgagttgctgaacgaggtgcgcgagcgcctgttcgcg
cgctgggcggccgcgcctgcctcgccggagggcgcagcgctgctcgcgctgctcgcttcg
ctcggcgagcacaatctgcgcgcgctgctgcgcaatttcatcgccgcgcgcatcgaatgg
caggccttcgcgcgcgatcaggccgacccggtcggctatgcgctcggagaattgcagcat
tgcctgcagagcgagctcgacgccgatccggtcgcggcgttctgggccgatccggcgctg
cgcgcacgcgtcgggcggctcggcgaggcgctcgagaaaggcagcgagactgagcgcaag
aaggcgctggccatccgtgaagcgatcgacgccgccgacgtcgtgcagctgcgcggactg
atcctgaagaaggacggcgaacgtctggccaaaaaagcgaatgcatcgacactcgccgcg
ctcggcgccgaggccgacacgttcttgcgcgactacgccagcgtcgaggacgcgctcgaa
gcgctcgcccgccaccagacggacttgcgcatccgggagctcaatcgccatggcctgctg
ctcggccatgccctgttcacggcttatcaggatgcgaagcgacggcagggcgtgatcgac
ttcgccgacgcggagtggctcggctgtcagctgctcatgagcgaggaatacgcgccggcg
ctggcgatgaagctcgacgcgcgctaccgccatctgctgctcgacgaattccaggacacc
aatccgctgcaatggcaggcgctctcgacctggctgctcgaagcgcgcggcggcgggagc
gaaatgacggtcttcatggtcggcgacccgaaacaggcgatctaccggtttcgccgcggc
gaggcacgcgtcttcgacgcggcgacggactttctgcacagtcatttcgaagccgcccgc
ttcagcaccgacatgacgcggcggctcgcgccgcctgtcgtcgccgccctaaaccccgtg
ttcgccggcgtcacgggcttcgcggaacatcggcacgcgccgcaaaacgccgagcgcccg
ggcgcgctgcgcgtactgccgctgcaggtcgagaaaaccgagccggtcaccgcaggggga
ttgcgcaatcccttgacgacagcgcggaccgaggccgaggaccgcgtcgtcgacgaagag
gcccgcgtattcgcccgtaccctgcgtgacgagatcctcggccgctggggcgtcatcgac
aagggcacgtcgcgggccgcggcgccgcgcgacgtcatcgcactggtcaagaagcgcacc
cacctgcacgtctacgaacgcgaactggaggctgcgcgcatcccctacatcacctcgcgc
cgcggcggcttgttgaacgcgctcgaggcacgcgacctcgtcgcgctcatcgaatgcctg
ctgctgccgcacgccgacctcaagctcgcacacgtgctgaagagcccgatcttcgactgc
agcgacgacgacctgctgagcgtgttcgccccgcagcctgacgccggtgcgcgcggctgg
gaacgcctgctggcgctcgccgaggcgccccacgccacggcagaagccgcccgcgcggcg
cggcttctgccgcgctggcgcgaacgctgcggcacgctgccggtgcacgacctgctcgac
cacatctattgcgaaggggacgtcgaagcacgctacgccgccgcggtgccgccggcacgg
cggccccaggtcgaagccaacctgcgcgccttcatgcaactggccctgacccaggacgcc
ggccgctatccgacgctcgccggcttcgtgcgcgagctcgcgtcgctcatcgacgacgcc
gacgcgtcgcccgacgaaggcctcgcggccgacggcgccgacgcggtcaggctcctgacc
atccacggcgcgaagggcctcgaggcgcccatcgtctggctgctcggcggcagcgaccgt
ccgcacggcgaaagctacggcgtgctcgcgccgtggccgccggacgcgccggcgccgctg
catttttcgctgttcggcaaacaggacgagcgcggcgcgggcagacagggctcgttcgac
gaggagaagacgctcgccgaacgcgaagcggacaatctgctttacgtcgcgctcacgcgc
gccgaacaggccctgatcgtcagcggcgacgccggcaagaacgcctgggtccagcgcgtc
gaagcggcctggcacgcgctcgacctgccggcggacctgcccgtcgccgccgaggcaggg
acgcacaacatcgagctgcggaccccgatcgaagcgccgccgatcggccgccgtgtcgcc
tcgccggggcacaacgcggcggcggcgagcggggaatttttccacgcctgtctcgaggtc
cacgcaccgcccggcgcgccgcgcaagctcgccgaactcgcgatgcatctcgggctcgag
cgcgaacacgcgcggatcgaagccgaggcacgcgccctcctcgcgcggccggaactcgcg
catctgttcgacccggcacgctatcggcgcgcatacaacgagctcgcgctgctcgaccgc
gacgggcgcttgcagcgcgccgaccgcgtcgtcgagggcgaggacgcggtctggctcgtc
gactacaagatgggcgagcagagccgtttgctgtccgacaccgcgctcgccgaggcgcat
cgcgcgcaactcgccggttatcggtccttgctcgccgcgctctatccgcacaaaccggtc
catgccgtgctgctgctcgccgacggccgcctggtcgaggtcgacaccgacgtcgccaac
ccgctttccttcctggagccacgcccgtga
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integrated database retrieval system
