| Entry |
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| Name |
(GenBank) conserved hypothetical protein
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| KO |
| K16898 | ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] |
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| Organism |
tbd Thiobacillus denitrificans
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| Brite |
KEGG Orthology (KO) [BR:tbd00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:tbd03400]
Tbd_0033
Enzymes [BR:tbd01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tbd_0033
DNA repair and recombination proteins [BR:tbd03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Tbd_0033
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(32000..35269)
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| AA seq |
1089 aa
MREALDAAIALSPNRSAVVEACAGSGKTWLLVSRMLRLLLAGAAPSELLAITFTRKAAQE
MTDRLHEWLRVLALADDATVRAFLREREVPADEIDALLPRARGLLEAVLSAQPGPTVTTF
HGWFLDLLKRAPLEAGLPWGAPLLERESELLNEVRERLFARWAAAPASPEGAALLALLAS
LGEHNLRALLRNFIAARIEWQAFARDQADPVGYALGELQHCLQSELDADPVAAFWADPAL
RARVGRLGEALEKGSETERKKALAIREAIDAADVVQLRGLILKKDGERLAKKANASTLAA
LGAEADTFLRDYASVEDALEALARHQTDLRIRELNRHGLLLGHALFTAYQDAKRRQGVID
FADAEWLGCQLLMSEEYAPALAMKLDARYRHLLLDEFQDTNPLQWQALSTWLLEARGGGS
EMTVFMVGDPKQAIYRFRRGEARVFDAATDFLHSHFEAARFSTDMTRRLAPPVVAALNPV
FAGVTGFAEHRHAPQNAERPGALRVLPLQVEKTEPVTAGGLRNPLTTARTEAEDRVVDEE
ARVFARTLRDEILGRWGVIDKGTSRAAAPRDVIALVKKRTHLHVYERELEAARIPYITSR
RGGLLNALEARDLVALIECLLLPHADLKLAHVLKSPIFDCSDDDLLSVFAPQPDAGARGW
ERLLALAEAPHATAEAARAARLLPRWRERCGTLPVHDLLDHIYCEGDVEARYAAAVPPAR
RPQVEANLRAFMQLALTQDAGRYPTLAGFVRELASLIDDADASPDEGLAADGADAVRLLT
IHGAKGLEAPIVWLLGGSDRPHGESYGVLAPWPPDAPAPLHFSLFGKQDERGAGRQGSFD
EEKTLAEREADNLLYVALTRAEQALIVSGDAGKNAWVQRVEAAWHALDLPADLPVAAEAG
THNIELRTPIEAPPIGRRVASPGHNAAAASGEFFHACLEVHAPPGAPRKLAELAMHLGLE
REHARIEAEARALLARPELAHLFDPARYRRAYNELALLDRDGRLQRADRVVEGEDAVWLV
DYKMGEQSRLLSDTALAEAHRAQLAGYRSLLAALYPHKPVHAVLLLADGRLVEVDTDVAN
PLSFLEPRP |
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| NT seq |
3270 nt +upstreamnt +downstreamnt
atgcgtgaagcgctcgacgccgccatcgcgctctcgcccaaccgttcggcggtcgtcgaa
gcctgcgccggcagcggcaagacctggcttctcgtgtcgcgcatgctgcgcctgctgctc
gccggcgcggcgccgtcggaactgctcgcgatcaccttcacgcgcaaggcggcgcaggaa
atgaccgatcgcctgcacgaatggctgcgcgtgctggcgctcgcggacgacgcgaccgtg
cgcgcttttttgcgcgaacgcgaggtgccggccgacgagatcgacgcgctgctgccacgc
gcgcgcggactgctcgaagcggtactgagcgcgcagcccgggccgacggtgacgacgttt
cacggctggtttctcgacctcctcaagcgcgcgccgctcgaggccggcctgccctggggc
gcgccgctgctcgaacgcgaaagcgagttgctgaacgaggtgcgcgagcgcctgttcgcg
cgctgggcggccgcgcctgcctcgccggagggcgcagcgctgctcgcgctgctcgcttcg
ctcggcgagcacaatctgcgcgcgctgctgcgcaatttcatcgccgcgcgcatcgaatgg
caggccttcgcgcgcgatcaggccgacccggtcggctatgcgctcggagaattgcagcat
tgcctgcagagcgagctcgacgccgatccggtcgcggcgttctgggccgatccggcgctg
cgcgcacgcgtcgggcggctcggcgaggcgctcgagaaaggcagcgagactgagcgcaag
aaggcgctggccatccgtgaagcgatcgacgccgccgacgtcgtgcagctgcgcggactg
atcctgaagaaggacggcgaacgtctggccaaaaaagcgaatgcatcgacactcgccgcg
ctcggcgccgaggccgacacgttcttgcgcgactacgccagcgtcgaggacgcgctcgaa
gcgctcgcccgccaccagacggacttgcgcatccgggagctcaatcgccatggcctgctg
ctcggccatgccctgttcacggcttatcaggatgcgaagcgacggcagggcgtgatcgac
ttcgccgacgcggagtggctcggctgtcagctgctcatgagcgaggaatacgcgccggcg
ctggcgatgaagctcgacgcgcgctaccgccatctgctgctcgacgaattccaggacacc
aatccgctgcaatggcaggcgctctcgacctggctgctcgaagcgcgcggcggcgggagc
gaaatgacggtcttcatggtcggcgacccgaaacaggcgatctaccggtttcgccgcggc
gaggcacgcgtcttcgacgcggcgacggactttctgcacagtcatttcgaagccgcccgc
ttcagcaccgacatgacgcggcggctcgcgccgcctgtcgtcgccgccctaaaccccgtg
ttcgccggcgtcacgggcttcgcggaacatcggcacgcgccgcaaaacgccgagcgcccg
ggcgcgctgcgcgtactgccgctgcaggtcgagaaaaccgagccggtcaccgcaggggga
ttgcgcaatcccttgacgacagcgcggaccgaggccgaggaccgcgtcgtcgacgaagag
gcccgcgtattcgcccgtaccctgcgtgacgagatcctcggccgctggggcgtcatcgac
aagggcacgtcgcgggccgcggcgccgcgcgacgtcatcgcactggtcaagaagcgcacc
cacctgcacgtctacgaacgcgaactggaggctgcgcgcatcccctacatcacctcgcgc
cgcggcggcttgttgaacgcgctcgaggcacgcgacctcgtcgcgctcatcgaatgcctg
ctgctgccgcacgccgacctcaagctcgcacacgtgctgaagagcccgatcttcgactgc
agcgacgacgacctgctgagcgtgttcgccccgcagcctgacgccggtgcgcgcggctgg
gaacgcctgctggcgctcgccgaggcgccccacgccacggcagaagccgcccgcgcggcg
cggcttctgccgcgctggcgcgaacgctgcggcacgctgccggtgcacgacctgctcgac
cacatctattgcgaaggggacgtcgaagcacgctacgccgccgcggtgccgccggcacgg
cggccccaggtcgaagccaacctgcgcgccttcatgcaactggccctgacccaggacgcc
ggccgctatccgacgctcgccggcttcgtgcgcgagctcgcgtcgctcatcgacgacgcc
gacgcgtcgcccgacgaaggcctcgcggccgacggcgccgacgcggtcaggctcctgacc
atccacggcgcgaagggcctcgaggcgcccatcgtctggctgctcggcggcagcgaccgt
ccgcacggcgaaagctacggcgtgctcgcgccgtggccgccggacgcgccggcgccgctg
catttttcgctgttcggcaaacaggacgagcgcggcgcgggcagacagggctcgttcgac
gaggagaagacgctcgccgaacgcgaagcggacaatctgctttacgtcgcgctcacgcgc
gccgaacaggccctgatcgtcagcggcgacgccggcaagaacgcctgggtccagcgcgtc
gaagcggcctggcacgcgctcgacctgccggcggacctgcccgtcgccgccgaggcaggg
acgcacaacatcgagctgcggaccccgatcgaagcgccgccgatcggccgccgtgtcgcc
tcgccggggcacaacgcggcggcggcgagcggggaatttttccacgcctgtctcgaggtc
cacgcaccgcccggcgcgccgcgcaagctcgccgaactcgcgatgcatctcgggctcgag
cgcgaacacgcgcggatcgaagccgaggcacgcgccctcctcgcgcggccggaactcgcg
catctgttcgacccggcacgctatcggcgcgcatacaacgagctcgcgctgctcgaccgc
gacgggcgcttgcagcgcgccgaccgcgtcgtcgagggcgaggacgcggtctggctcgtc
gactacaagatgggcgagcagagccgtttgctgtccgacaccgcgctcgccgaggcgcat
cgcgcgcaactcgccggttatcggtccttgctcgccgcgctctatccgcacaaaccggtc
catgccgtgctgctgctcgccgacggccgcctggtcgaggtcgacaccgacgtcgccaac
ccgctttccttcctggagccacgcccgtga |
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