Thiobacillus denitrificans: Tbd_0034
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Entry
Tbd_0034 CDS
T00275
Name
(GenBank) conserved hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0034
Enzymes [BR:
tbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tbd_0034
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Tbd_0034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AAZ95987
UniProt:
Q3SMQ4
LinkDB
All DBs
Position
complement(35262..37772)
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AA seq
836 aa
AA seq
DB search
MLVPNHRAGLDFARALAREAGRAALVAPQITPLKAWAERFAEAAAEPQARRLARLHAALR
HSDWLGSVDKWALANELLRLIDELSAARAPGATGQPVLDLPPDVSPEREVALIEAVWRTL
NAGGDDPQARYAAALDALAADLTRAPRPIFGYALGPLSGGEQAFLARCADHAPLTLYEGD
ADDPVALTLRQAWLATEPPLQARATALATRFADSPVVEQITVAPAPHLEAEARAVASWVA
AQLRAGRQALALIALDRETARRVRALLERLDVLVADETGWALSTTVAAAVVDRWLECVAS
DFPHVELLDLLKSPFVLDDPAARQDQVLQLELALRRQRVAQGAADIERVARQEFGALPAW
LASLFDARQRFARTSAPLALWLQRLADSLDQLAARAPLEADAAGARVLETLAALGRDLAQ
DSEKYDFNEWRRWLGLALESASFVDAGVDSPIVLTSLPAARGRSFDAIAVIGADARHLPA
LPTPGLFSQATRRQLGLRTSADDAADAVTDLIALLGQGPALLSWRAWNDDEPNPASPLVL
RLQALHLAAWSSALPEQGIGEPPARASTLPGRCTRPAPVVPAARLPRRYSPTAYQTLLDC
PYHFFARAVLGIRELDEADDALDKSDYGNALHRILKRFHDGDPPHDPAQALALLDACAEA
EFAALPAYTAAAWRSKWSAIAPAYVDAWLEWAGEGWRHASSESEFAVAVAVAGLGEVTLH
GRVDRVDRRGDALAVIDYKTGSAQGLKKKLRMPDEAVQLPFYAWLCNARAAYLPINEAPV
APLELDGETDVDAISRRLPELLAALAAGAPLPAGGVEADCRYCAVRGLCRKGMWHA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgtccccaaccatcgcgccggactcgacttcgcccgggcgctggcgcgcgaagcc
gggcgcgcagcgctcgtcgccccgcagatcacgcccctcaaggcctgggccgagcgcttc
gccgaagctgctgccgagccgcaggcacgtcgactcgcgcggctgcacgcggccctgcgc
cacagcgactggctcggttcggtcgacaagtgggcattggcgaacgaattgctgcggctc
atcgacgagctgtcggccgcgcgcgcgccgggcgcaaccgggcagcccgtcctcgacctt
ccgccggacgtctcgccggagcgtgaagtcgcgctcatcgaggccgtctggcggacgctc
aacgccggcggcgacgacccgcaggcgcgttacgccgcggcgctggacgcgctcgctgcc
gacctcacccgcgcgccgcggccgatcttcggctacgcgctcggcccgctcagcggcggc
gagcaggcctttctcgcgcgttgcgccgaccatgcgccgctgaccctatacgaaggcgac
gccgacgaccccgtcgccttgaccctgcggcaggcctggctcgccaccgagccgccgctg
caggcacgcgccacggcgctcgccacgcgcttcgccgactcgcccgtggtggagcagatc
accgtggcgcccgcaccgcatcttgaagcggaggcgcgcgccgtcgcgagctgggtcgcc
gcgcaactgcgcgcgggcaggcaggcgctcgcactgatcgcgctcgaccgcgaaaccgcc
cgccgggtacgcgcgctgctcgaacgcctcgacgttctcgtcgccgacgaaaccggctgg
gcgctttcgacgacggtcgccgccgcggtcgtcgaccgctggctcgaatgcgtggccagc
gactttccgcacgtcgagctgctcgacctgctcaagtcgcctttcgtgcttgacgatcca
gccgcccgccaggaccaggttctgcagctcgaactcgcgctgcgccgccagcgggtggcg
cagggcgcagccgacatcgagcgcgttgcgcggcaggagttcggcgcgctccccgcatgg
ctcgcttcgctgttcgacgcacgccagcgttttgcccgcacctccgccccgctcgcgctc
tggctgcagcgactcgccgacagcctcgaccagctcgccgcccgggcaccgctcgaagcc
gacgccgccggcgcccgcgtgttggagacgctcgccgcactcggtcgcgatctcgcgcaa
gactccgaaaaatacgacttcaacgaatggcggcgctggctcggtctcgcactcgagtcg
gcgagcttcgtcgacgccggcgtcgacagcccgatcgtgttgacgtcgctgcccgccgcg
cgcggacgcagcttcgatgccatcgcggtgatcggcgcagacgcccgtcacctgcccgca
ctacccacgccgggcctgttttcgcaagccacgcgccgccagctcggtctgcgcacgagc
gcggacgacgccgccgacgccgtcaccgacctcatcgcattgctcggccagggacctgca
ctcctgagttggcgcgcatggaacgacgacgagcccaacccggcgtcgccgctcgttctg
cgcctccaggccctgcacctcgcggcgtggagcagcgccctgcccgagcagggtatcggc
gagccgcccgcccgggcgagcacgctgcccggacgctgcacgcgcccggcgccggtcgtg
cccgctgcgcgactgccgcggcgctattcgccgacggcctatcagacactgctcgattgt
ccttaccatttcttcgcccgcgccgtactcggcatccgcgaactcgacgaagccgacgat
gcgctcgacaagagcgactacggcaacgcgctgcaccggatcctcaagcgcttccacgac
ggcgacccgccgcacgatcccgcgcaggcgctggccttgctcgacgcctgcgcggaggcc
gaattcgcggcgctgcccgcgtatacggccgcggcctggcgcagcaagtggagcgcgatc
gcgccggcctacgtcgacgcctggctcgagtgggcgggcgaaggctggcgccatgcgtcg
agcgaatcggagttcgcggtcgcggtcgcggtcgccggcctcggcgaagtcacgctgcac
ggccgcgtcgaccgcgtcgaccgccgcggcgacgcgctcgccgtgatcgactacaagacc
ggcagcgcgcaaggcctgaagaagaagctcaggatgccggacgaagccgtgcagctgccg
ttctatgcctggctgtgcaacgcgcgcgccgcctacctgccgatcaacgaagcgcccgtc
gccccgctcgaactcgacggcgagaccgacgtcgacgcaatcagccgccgtctgcccgaa
ctgctcgcggcgctcgccgccggcgcgccgctaccggcgggcggggtcgaggccgactgc
cggtactgcgcggtgcgcggcctgtgccgcaagggcatgtggcatgcgtga
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