Thiobacillus denitrificans: Tbd_0085
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Entry
Tbd_0085 CDS
T00275
Name
(GenBank) Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation
Organism
tbd
Thiobacillus denitrificans
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GFIT
Motif
Pfam:
EAL
GGDEF
Response_reg
PAS
PAS_9
PAS_3
PAS_4
PAS_8
PAS_11
Motif
Other DBs
NCBI-ProteinID:
AAZ96038
UniProt:
Q3SMK7
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Position
88385..90601
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AA seq
738 aa
AA seq
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MHKENAPVSDDPLHPHPQRSTVSSFPARPRILVVDDEILILEGMRRLLAARDYDVTTANG
GCEALIAIGKQQFDVILLDLGMPDLSGAEVLRFVADRSADTPVIVVSGDSTIDAAIRALR
GGAADFVRKPYEPEELLRRVDNTLTRRRLERENNHILQRLQQSEKWHRFLVNSSPDFIYT
LDCDGRFTFVNDRVESLLGYTREDLLGQHYSTIIHEEDLARAEHVFNERRAGDRSARNIE
IRLKCNPGMRRPRLMNGRCKAVELTATGMYDEDATLFERRFIGSYGVAKDVTERKQAEET
VHYQAYHDLLTGLPNRALFRDHLALMLAQAKRSHKTLAVLSLDLDHFKVINDSLGHTIGD
ELLLAVGARLRQCLREGDTLARLGGDEFAVLLPTLLSRGDVEQICRKIIQVLSRPVYVKG
HEIYISVSIGACVAPDDGEMIDSLIRQAEIAMYQAKAQGRSRLQFWEAGMQAPYSERMQI
EADLRRALARNEFVLFYQPQVDTVSGEVRGFEALLRWWHPQRGFLSPAEFIPVAEESGVI
VPIGDWVLREASAQMAEWRRAGLPQVRLSVNISARQLESPDFVESVMRAVQVHALDGQQI
ELEITESLLMRDFEANAIKLGRLSASGIRLAIDDFGTGYSSFKYLSRFPIHTLKIDQSFI
QELEREENLSIVNAMVAMGRGMNLNVVAEGVETQSQLACLQQMQCHEMQGHYYSVPMSGH
DATALLGRHTRGFVEAAG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaaggagaacgcccccgtgtcagacgaccccttgcatccccacccgcagcggagc
acggtgagcagcttccccgcgcgtccgcgcatcctcgtcgtggacgacgagatcttgatc
ctcgaaggcatgcggcggctgctcgcggcgcgcgactacgacgtgacgaccgcgaacggc
ggctgcgaggccctgatcgcgatcggcaagcagcagttcgacgtcatcctgctcgatctc
ggcatgcccgacctgagcggcgccgaagtgctgcgtttcgtcgcggaccgcagcgcggac
acgccggtgatcgtcgtgtccggagacagcacgatcgacgccgcgatccgcgcgctcagg
ggcggcgcagccgacttcgtgcgcaagccctacgagcccgaggagctgctgcgccgcgtc
gacaacacgcttacgcgccgtcgcctcgaacgcgaaaacaaccacatcctgcagcggctg
cagcaatccgagaagtggcaccgcttcctcgtcaacagttcgcccgatttcatctacacg
ctcgactgcgacggccgcttcaccttcgtcaacgaccgcgtcgaaagcctgctcggctac
acgcgcgaggacctgctcggacagcactacagcacgatcatccacgaggaggacctcgcg
cgcgcggagcacgtcttcaacgaacggcgggccggcgaccgcagcgcgcgcaacatcgag
atccgcctcaagtgcaacccgggcatgcggcggccgcgcctcatgaacggccgctgcaag
gccgtcgagctgaccgcgacgggcatgtatgacgaagacgccacgcttttcgagcgccgc
ttcatcggcagctacggcgtcgcgaaagacgtcaccgagcgcaagcaggccgaggagacc
gtgcattaccaggcctatcacgacctgctcaccggtctgccgaaccgcgcgctgttccgc
gatcacctcgcgctgatgctcgcgcaggccaagcgcagccacaagaccctggccgtgctg
agtctcgatctcgatcatttcaaggtcatcaacgactcgctcggccataccataggcgac
gaactgctgctcgcggtcggcgcgcgcctgcgccagtgcctgcgcgagggcgacacgctc
gcgcgcctcggcggcgacgagttcgcggtgctgctgccgaccctgctgtcccgcggcgac
gtcgaacagatctgccgcaagatcatccaggtcctgtcccggcccgtgtacgtcaagggt
catgaaatctacatctcggtcagcatcggtgcctgcgtcgcgcccgacgacggcgagatg
atcgacagcctgatccgtcaggcggagatcgcgatgtaccaggccaaggcgcagggccgc
agccggctgcagttctgggaagccggcatgcaggccccctattccgagcgcatgcagatc
gaagccgacctgcggcgtgcgctcgcgcgcaacgaattcgtgctgttctaccagccgcag
gtcgacaccgtgagcggcgaggtgcgcggtttcgaggcgctgctgcgctggtggcacccg
cagcgcggcttcctgagcccggccgagttcattccggtcgccgaagaatccggcgtcatc
gtgccgatcggggactgggtgttgcgcgaagcgagcgcccagatggccgaatggcgccgc
gccgggctgccgcaggtgcgcctgtcggtcaacatctcggcgcgccagctcgagagcccc
gacttcgtcgagagcgtcatgcgtgccgtacaggtccatgcactcgacggccagcagatc
gaactcgaaatcaccgagagcctgctgatgcgcgacttcgaggccaacgcgatcaagctc
gggcgcctgtcggcgtcgggcataaggcttgcgatcgatgacttcggaaccggctacagc
tcgttcaagtacctctctcgcttcccgatccatacgctcaagatcgatcagtcctttatc
caggagctcgagcgcgaggagaacctctcgatcgtcaacgcgatggtcgcgatgggccga
ggcatgaatctcaacgtcgtcgccgagggggtcgagacgcagtcgcaactggcctgcctg
cagcagatgcagtgtcacgagatgcagggccactactacagcgtgccgatgtctggccac
gatgccaccgcactgctcggccggcatacgcgtggctttgtcgaggcggccggttga
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