Thiobacillus denitrificans: Tbd_0108
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Entry
Tbd_0108 CDS
T00275
Name
(GenBank) Protein of unknown function UPF0011
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbd03009
]
Tbd_0108
Enzymes [BR:
tbd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Tbd_0108
Ribosome biogenesis [BR:
tbd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Tbd_0108
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AAZ96061
UniProt:
Q3SMI4
LinkDB
All DBs
Position
114386..115579
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AA seq
397 aa
AA seq
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MPPLSATTSKRQGGRVFRFARYWRAAASNRFCLAVVTLAAAPPKSARLRTRTSTNTRTAP
SCMTRSISPKRQRQLRVTSLRPCACRKLAARDSPDCPSRDFNICDNARMSESAHLTPLFP
GLYVVATPIGNLGDITLRALDILKRVDRVAAEDTRVSGQLLAHFDISKPLISVREHNERE
AAAGVVARILAGDAVAYVSDAGTPAVSDPGARLVAAVRAAGQRVVPIPGVSAVTTALSAA
GLESGSWLFHGFPPPKPGPRRAQLQSLAALPVALVFYEAPHRIEETLADMVAVLDGARGV
TLARELTKRFETIVNLPLADAPAWLAADPNNVRGEFVVIVHPPSSAVAVDAEAMRVLDIL
QAELPPTLAAKLAAQITGRSKAELYKMSLALKPRSDA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcagcgccacgacgtcgaagcggcagggtggcagggtcttcaggttcgca
agatattggcgcgccgccgcgagcaatcgcttctgcttggcggtcgtcacgctcgccgcg
gcgccgccgaagtcggcgcggctgcgcacacgcacctcgacgaacacgaggactgcgccg
tcgtgcatgacgagatcgatttcgccgaaacggcagcgccagttgcgcgtcacgagtctg
agaccgtgcgcttgcagaaagcttgcggcgcgcgactcgccggattgtccgagcagggat
ttcaacatctgcgacaatgcgcgcatgagtgaaagtgcgcatcttaccccgctgtttccc
gggctttacgtcgtcgcgacgccgatcggcaatctcggcgacatcacgctgcgcgcgctc
gacatcctcaagcgcgtcgaccgcgtcgcggccgaggatacgcgcgtctcagggcaattg
ctcgcccatttcgacatttccaagccgctgatctccgttcgcgagcacaacgagcgcgaa
gccgccgcgggcgtcgtcgcccgcattcttgccggcgatgcggtcgcctacgtgtcggac
gcgggaacgcccgcggtctccgatccgggcgcgcggctcgtcgcggccgtgcgtgccgcc
ggtcagcgcgtggttccgattcccggcgtgtcggcggtcacgacggcgctgtcggcggcc
ggccttgagtcgggatcgtggctgtttcacggctttccgccgcccaagccggggccgcgc
cgcgcgcagttgcaatcactcgcggcactgccggtcgcgctcgtgttctacgaggcgccc
catcgtatcgaggagacgctcgccgatatggtcgccgtgctcgacggcgcgcgcggcgtc
acgctcgcgcgcgaactgaccaagcgcttcgagaccattgtcaatctgccgctagccgac
gcgccggcctggctcgccgcggaccccaacaatgtgcgcggcgaattcgtcgtcatcgtc
catccgccgtcgagcgcggtcgccgtcgacgccgaggcgatgcgcgttctcgacatcctg
caggccgagctgccgccgacgctcgcggccaagctcgccgcgcagatcacgggacgcagc
aaggccgaactctataaaatgtcgctggccctgaaaccccgttctgacgcatga
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