Thiobacillus denitrificans: Tbd_0117
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Entry
Tbd_0117 CDS
T00275
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd00470
D-Amino acid metabolism
tbd00550
Peptidoglycan biosynthesis
tbd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Tbd_0117
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Tbd_0117
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Tbd_0117
Enzymes [BR:
tbd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Tbd_0117
Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Precursor biosynthesis
Amino acid ligase
Tbd_0117
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Shikimate_DH
2-Hacid_dh_C
DAO
XdhC_C
AdoHcyase_NAD
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AAZ96070
UniProt:
Q3SMH5
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All DBs
Position
124878..126302
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AA seq
474 aa
AA seq
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MNYDALQLSGRKVLVLGLGDTGLSCARWLSVHGADVSVADSREAPPHAARLAETLPQVAL
FTGPFEAAHLAAADMLVLSPGVPLSEPAVAQAVAQGVEAVGDVELFARALAVLNAQRAAL
PAPQAAMRVIAITGSNGKSTVTAMCGDMCRMAGLTVCVAGNIGLPVLDALHEIEQGAAPL
PQVWVLELSSFQLETTSSLDATAAAVLNLSEDHMDRYPDMAAYAAAKARIFSGNGVQVLN
RDDPRTLAMAIPGRHVVSFGLDRCPTDENFGLCEDELCLGGDMLMPLSVLAVPGLHNAAN
ALAALALTRALDLPIEALLRGLMHFKGLPHRVEKVADIDGVTWYDDSKGTNVGATEAALY
GMGRRKAVVILGGDGKGQDFGPLKAAVAANARAVVLIGRDAVAIEAAIEDSGVASYRADT
LPDAVEQAARLAEPGDAVLLSPACASFDMFRNYVHRAEVFVDAVKKLAAQRAQV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgacgcgctgcaactctccggccgaaaggtcctcgtgctcggcctcggcgac
accggcctgtcttgcgcgcgttggctcagcgtgcatggcgccgacgtgagcgtcgccgac
agccgcgaagcgccgccccatgcggcccgcctcgccgagacgctgccgcaggttgcgctt
ttcaccgggccgttcgaggcggcgcatctggccgcggccgacatgctcgtgctgagtccg
ggcgtgcccctgtccgagccggcggttgcccaagcggtcgcgcagggcgtcgaagcggtc
ggcgacgtcgagctgttcgcccgcgcgctggccgtgctgaatgcgcagcgcgcggctttg
ccggcgccgcaggcggcgatgcgcgtgatcgcgatcacggggagcaacggcaagagcacg
gtcaccgcgatgtgcggcgacatgtgccggatggccggtctcaccgtgtgcgtcgccgga
aacatcggcctgccggtgctcgacgcgctgcatgagatcgagcagggcgccgcgccgctg
ccgcaggtctgggtgctcgagttgtcgagcttccagctcgagacgacctcgagcctcgac
gccacggcggcggctgtcctcaacctgtccgaggaccacatggaccgctaccccgacatg
gccgcgtacgcggcggcgaaggcgcgcatcttcagcggaaatggcgtgcaggtgctgaac
cgcgacgacccgcgcacgctcgcgatggcgattcccggtcgacatgtcgtgagcttcggc
ctcgaccgctgtccgaccgacgagaacttcggcctgtgcgaggacgaactgtgcctcggc
ggcgacatgttgatgcccttgtcggtgctcgccgtccccggccttcataacgccgcgaac
gcgctcgccgcgctcgcgctgacccgtgcgctcgatctgccgatcgaggccctgctgcgc
ggcttgatgcatttcaagggcctgccgcatcgcgtcgagaaagtcgccgacatcgacggc
gtgacctggtacgacgactccaagggcaccaatgtcggtgcgaccgaggcggctctctac
ggcatggggcggagaaaagcggtcgtcatcctcggcggcgacggcaaggggcaggatttc
ggtccgctcaaggccgcggtcgcggccaatgcgcgcgccgtcgtgttgatcggccgcgac
gctgtggccatcgaggccgcgatcgaagactcgggcgtcgcgagctaccgcgccgacacg
ctgcccgacgcggtcgagcaggcggcgcgtcttgccgagccgggcgacgcggtgctgctg
tcgccggcctgcgcgagcttcgacatgttccgcaactacgttcaccgcgccgaggtcttc
gtcgacgcggtgaagaaactcgccgcgcaaagggcgcaggtctga
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