Entry |
|
Name |
(GenBank) outer membrane protein
|
KO |
K03286 | OmpA-OmpF porin, OOP family |
|
Organism |
tbd Thiobacillus denitrificans
|
Brite |
KEGG Orthology (KO) [BR:tbd00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:tbd02000]
Tbd_0127
Transporters [BR:tbd02000]
Other transporters
Pores ion channels [TC:1]
Tbd_0127
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
136341..137588
|
AA seq |
415 aa
MRGGRTCALACIDPAESDSCSINSRNGPGAGVFRTSPSRSYARGRASQAPGGGRKVCASR
GLVGVFRVTTSIEGEKRMRIRTLPVCLALAAAVVQAHAADDRFYLAPSVNYTFADSDRQA
DDDWGLGLALGKPVSRHWNLELALSGASLNMDSGGGEYDLIGLGVDAVYLVNRDADFTPY
GVVGVGALRTDIPGSDDVGVAASAGVGVLKRLTENVALRADARYRWDDNAADAFNEDNFG
DWIVGVGLTIALGKSAQAAPAPQAAVEPVPAPEPAPAAPEPAAAPAPALQTEQAAQLERS
QAGDVVVLPEGVNFAFDSAELRPDAVTVLDEAVTVLNRRTDIKVDVVGHTCNIGPEAYNQ
GLSERRAKSVYDYFIDNGVAADRLTTQGYGETRPAYSNDTREGREKNRRVELHVK |
NT seq |
1248 nt +upstreamnt +downstreamnt
gtgcggggcggcaggacctgcgctctcgcatgcatcgacccggcggaatccgattcttgc
tctataaacagtaggaatggaccgggtgcgggggtttttcgtacgtccccttcacgttcg
tacgcccgagggagggcgtcgcaggctcccggcggcgggcggaaggtgtgtgccagtcgg
ggacttgtcggggtgtttcgtgtaacgacgtcaatcgaaggagaaaaacgcatgcgcatc
agaacccttcccgtctgtctcgccctcgccgcggccgtggtccaggcccacgcggcggac
gaccgcttctacctcgcgccgtcggtgaactacaccttcgcggacagcgaccgccaggcc
gacgatgattggggtctgggcttggcgctcggcaagccggtcagccgccactggaatctc
gagctcgcgctctccggtgcctccctgaacatggatagcggcggcggcgagtacgacctg
atcgggctgggcgtcgatgcggtgtatctggtgaaccgcgacgccgatttcacgccgtat
ggcgtcgtcggcgtcggtgcgttgcggaccgatatccccgggtccgacgacgtcggcgtc
gcggcgagcgccggcgtgggcgtgctcaagcgcctgaccgagaacgtcgccttgcgcgcg
gacgcacgctatcgctgggacgacaacgccgccgacgcgttcaacgaggacaatttcggc
gactggatcgtcggcgtcgggctcacgatcgcgctcggcaagtccgcacaggccgcgccc
gccccgcaggccgccgtcgagcccgtgcccgcgccggaaccggctcccgccgcgcccgaa
ccggcggcggcgcctgcgcccgcgctgcagaccgaacaggcggcccagctcgagcggtcg
caggccggcgacgtggtggttctccccgaaggcgttaatttcgcattcgattccgccgag
ctgcgtccggacgccgtgaccgttctcgacgaggcggtgaccgtgctcaaccgccgcacc
gacatcaaggtcgacgtcgtcggccacacctgcaacatcggccccgaggcctacaaccag
ggcctgtcggagcgccgcgccaaatcggtatatgactatttcatcgacaacggcgtcgcc
gccgaccggctcactacccagggctacggtgaaacccgtccggcgtacagcaacgacacg
cgggaagggcgggagaaaaaccggcgcgtcgaactgcacgtgaaataa |