KEGG   Thiobacillus denitrificans: Tbd_0226
Entry
Tbd_0226          CDS       T00275                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
tbd  Thiobacillus denitrificans
Pathway
tbd00300  Lysine biosynthesis
tbd00470  D-Amino acid metabolism
tbd01100  Metabolic pathways
tbd01110  Biosynthesis of secondary metabolites
tbd01120  Microbial metabolism in diverse environments
tbd01230  Biosynthesis of amino acids
Module
tbd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tbd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Tbd_0226
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Tbd_0226
Enzymes [BR:tbd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Tbd_0226
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AAZ96179
UniProt: Q3SM71
LinkDB
Position
complement(248334..249578)
AA seq 414 aa
MNAPHRIDGRLHLEGVALDTLAERCGTPLYVYSRAALEAAYRAYEEAFAATPHLICYAVK
ANSSLALLNLFARMGAGFDIVSGGELARVLSAQGDPRKVVFSGVGKRVDEMRAALEAGIL
CFNVESTSELHRLNRVAGELGKVAPVSFRVNPDVDPKTHPYISTGLKENKFGVPIAEAPA
LYRTAAALPHIRVTGIDCHIGSQLLDLSPLADAADRVFALVDALAAEGIALEHIDLGGGV
GISYRGETAPDLAGYGRVLAERFAGRRETLIVEPGRSLVGNAGLLLARVEYLKLGADKNF
AIVDAAMNDLMRPALYEAYHEIVEVIARPLPKRRYDVVGPICETGDFLGSARELSLDEGD
LVALLSSGAYGMSMSSNYNSRPRAAEILVDKKEIHLIRERETQEGLMAGERLLD
NT seq 1245 nt   +upstreamnt  +downstreamnt
ttgaacgctccccatcgcatcgacggccgcctccatctcgagggcgtggccctggacacg
ctcgccgagcgctgcggaacccccctctacgtctactcgcgtgccgccctcgaagccgcg
taccgcgcctatgaagaagcgttcgccgcgacgccgcatctgatctgttacgcagtcaag
gccaactcgagcctggccctcctgaacctgttcgcccggatgggcgccggtttcgacatc
gtctccggcggcgagctcgcccgcgtactctcggcgcagggcgatccgcgaaaagtcgtg
ttctcgggcgtcggcaaacgcgtggacgagatgcgcgccgcgctcgaggcgggcattctc
tgcttcaacgtcgaatcgacgagcgagctgcaccggctgaaccgcgtggcgggagagctc
ggcaaggtcgcgccggtctccttccgcgtcaatccggacgtcgacccgaagacccatccc
tatatctcgacggggctcaaggagaacaagttcggcgtcccgatcgcggaggccccggcg
ctctatcgcacggcagccgcacttccgcacatcagggtgaccggcatcgactgccacatc
ggctcgcagctgctcgacctgtccccgcttgccgacgcagcggaccgcgtgttcgcactc
gtcgacgcgctcgcggccgaaggcattgcgctcgaacacatcgacctcggcggcggcgtc
ggaatctcctatcgcggagaaaccgcgcccgacctcgccggctacggccgcgttctcgcc
gaacgctttgccggccggcgagaaacgctgatcgtcgagcccggccgctcgctcgtcggc
aacgccggccttctgctcgcgcgtgtcgaatacctgaagctgggcgcagacaagaacttc
gcgatcgtcgacgccgcaatgaacgacctcatgcggcccgcactgtacgaggcttatcac
gagatcgtcgaggtgatcgcgcgcccgctgcccaagcggcgctacgacgtcgtcggcccg
atctgcgagaccggcgatttcctgggatccgcacgcgagctttcgctcgacgagggcgac
ctcgtcgcgctgctttcgtcgggcgcatacggcatgagcatgtcgtcgaactacaattcg
cgcccccgcgcggcggaaattctcgtcgacaagaaagaaattcatctgattcgcgagcgc
gaaacgcaggaaggcctgatggccggagagcggcttctggactga

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