Thiobacillus denitrificans: Tbd_0515
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Entry
Tbd_0515 CDS
T00275
Name
(GenBank) DNA polymerase subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd03030
DNA replication
tbd03430
Mismatch repair
tbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tbd_0515
03430 Mismatch repair
Tbd_0515
03440 Homologous recombination
Tbd_0515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbd03032
]
Tbd_0515
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0515
Enzymes [BR:
tbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tbd_0515
DNA replication proteins [BR:
tbd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tbd_0515
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tbd_0515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_5
AAA_14
AAA_30
AAA_16
AAA_19
AAA_18
PIF1
AAA_24
TsaE
nSTAND3
Mg_chelatase
DUF3646
AAA_28
Adeno_E1B_55K_N
DUF815
AAA_7
ABC_tran
AAA_assoc_2
Rad17
Herpes_Helicase
NTPase_1
NACHT
ORC-CDC6-like
SKI
Motif
Other DBs
NCBI-ProteinID:
AAZ96468
UniProt:
Q3SLE5
LinkDB
All DBs
Position
544784..546529
Genome browser
AA seq
581 aa
AA seq
DB search
MTDLFGESASPAMALARKWRPRAFADLRGQEHVVQALSNALTQGRLHHAYLLTGTRGVGK
TTLARILAKCLNCESGVSATPCGTCSACTQIDAGRFVDLLELDAASNTGVDNMREVLDNA
QYAPTVGRYKVYIIDEVHMLSKPAFNSMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCL
QFNLKPMTPALVAGHLGDVLAQERVDAEPAALNLLARAAAGSMRDALSLTDQAIAYGGGR
IEAAAVEAMLGTVRRDYLFDLLDALAAGDGDALMTQARLLAERGIAFDATLQDLGNLLTQ
LALVLHAPGAVEDGADAERTRAAAEKLDAETVQLYYQIALNGRRDLPYAPDEFSGFCMTL
LRMLAFAPATDPTPRSPGGGRAPVASADSTPAAAPLAAPAPARVPAAAPAPLQQPEAARQ
VASAEPLAAEDADSPRAAAAPPDAPFVAAEPAPAAQWDWLAVVAGLRLGGMAKMLADHCE
LVAQTGDSVTLRVGEAHKHLLDRAYQDRLTGALREKYGPALQITFEVGSAADQTPQQVRT
RIKEARQAEAIAAIEADPFVRELVEQFGGQVEASTIQPLAP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgactgacctcttcggcgaatccgcttcccccgcaatggcgctggcgcgcaaatggcgg
ccgcgcgcgtttgccgatctgcgcggccaggagcatgtcgtgcaggcgctgtcgaacgcg
ctgacccaggggcgactgcatcacgcctacctgctcaccggcacgcgcggcgtcggcaag
accacgctggcgcggattctcgccaagtgcctgaattgcgaaagcggcgtgagtgcgacg
ccttgcgggacctgctcggcgtgcacccagatcgacgcgggacgcttcgtcgacctgctc
gagctcgacgcggcgtcgaacaccggcgtcgacaacatgcgcgaggtgctcgacaacgcg
caatacgcgccgaccgtcggccgctacaaggtctacatcatcgacgaagtgcacatgctc
tcgaagccggccttcaactcgatgctgaagacgcttgaagaaccgcccgcgcacgtcaag
ttcatcctcgcgacgaccgatccgcagaagattccggtgacggtgctgtcgcgctgcctg
cagttcaacctcaagccgatgacgcccgcgctcgtggccgggcacctcggtgacgtgctc
gcccaggagcgcgtcgacgcggaacctgccgcgctgaacctgctcgcgcgcgcggccgcc
ggcagcatgcgcgacgcgctctcgctgaccgaccaggcgatcgcctacggcggcggcagg
atcgaggcggcagcggtcgaggcgatgctcggcaccgtgcgtcgcgattatctgttcgac
ctgctcgacgcgctggcggcgggtgacggcgacgcgctcatgacgcaggcgcgcctgctc
gccgaacgcggcatcgcgttcgacgcgacgctgcaggaccttggcaacctgctgacccaa
ctggcgctcgtgctgcacgcgccgggcgccgtcgaggacggcgcggacgccgagcggaca
cgcgcggccgccgaaaagctcgacgccgaaacggttcagctctattaccagatcgcgctg
aacggccgccgcgacctgccttacgcgcccgacgagttttccgggttctgcatgacgctg
ctgcgcatgctggccttcgcgccggcgaccgatcccacgccgcgcagcccggggggcgga
cgcgcccctgtcgcctcggcggactcgacgccggccgctgcccccctcgccgcacctgcg
ccggcccgcgtcccggccgcagcgccagcgcctttgcagcaaccggaagccgcccgccag
gtggcctccgctgagccgctcgcagccgaggacgccgactcccctcgcgctgctgcggct
ccgccggacgcgccgttcgtcgccgccgagccggcacccgctgcgcaatgggactggctc
gccgtcgtcgcggggctccggctcgggggcatggccaagatgctcgccgaccattgcgaa
ctcgtcgcgcagacaggcgactcggtcacgctgcgggtcggcgaagcgcacaagcatctg
ctcgaccgcgcctatcaggaccggctcactggcgcgctgcgcgagaagtacgggccggcg
ctccagatcaccttcgaggtcggcagcgcggcagatcagacgccgcaacaggtgcgcacg
cggatcaaggaagcgcgccaggccgaagccatcgccgcgatcgaggcggacccgttcgtg
cgcgaactggtcgagcagttcggcggccaggtcgaggcttcaaccatccagccgctggcg
ccctga
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